Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00232 ATGTCAAGTTCTGGTGTCATCACCTGCAGAGCTGCGGTGGCATGGGGAGCTGGGAAGCCATTAGTGATCGAACAAGTACAAGTGAATCCTCCCCAACCTATGGAAATCAGGGTCAAAGTTGTTTCCACCTCTCTCTGCCGCAGTGACATTAACGCTTGGGAATCACATTACGTCCCTGCATCTAATAGAGAAGGTTTGCAAGTGCAGGACTTGTTCCCTCGAATATTTGGCCATGAAGCATCCGGGATTGTGGAGAGTGTAGGGGAAGGAGTGACTGAATTCACTGTTGGGGACCATGTTCTCACGGTGTTTATAGGAGAATGCAAGTCTTGCAAGCAGTGCAAATCTGGTAAAAGCAACATTTGCCAAGTACTAGGATTGGAAAGAAGAGGTGTCATGCACAGTGATCAGAAAACACGATTTTCTGTACAAGGGAAGCCCATATATCACTATTGTGCTGTTTCTAGTTTCAGTGAATATACTGTCGTCCATTCAGGATGTGCAGTCAAAATTAGCCCAGAACTGCCTCTTGAGAAGCTCTGCCTTCTGAGTTGTGGACTTGCTGCAGGTTTAGGAGCAGCCTGGAATGTTGCTGATATTTCAAAAGGATCAACGGTGGTAATATTTGGCCTTGGTACAGTAGGCCTATCTATTGCACAAGGCGCCAGAATTAGAGGAGCCTCTCGTATAATTGGTGTGGATAACAATCCTAAAAAGCATGAAATAGCTAAAGATTTTGGAATTACAGAATTTTTAAACCCAAGTTCCTATAATGAACCAATTCAACAGGTTATTAAGCGAATGACTGATGGTGGAGCAGATTACTCGTTTGAGTGCGTTGGGAATACTGAAATAGTTACTACAGCACTGCAGTCGTGTTGTGATGGATGGGGTTCAACTATTACTCTTGGTGTACCAAAATTGAAGCCTGAAGTATCTGCTCATTATGGACTGTTTCTCTTGGGAAGAACATTGAAGGGAACCCTATTTGGTGGTTGGAAACCCAAATCTGATCTCCCCTCACTTGTGCACATGTATCAAAGAAAGGAAATCCAGGTAGATGAGTACATCAGTCACAATTTGCCATTTGAATGTATTAATGAGGCTTTCAATCTTATGAAAGAAGGGAAGTGTTTGCGCTGTGTCATCCTAATGCCACAATGA 1164 0.433 MSSSGVITCRAAVAWGAGKPLVIEQVQVNPPQPMEIRVKVVSTSLCRSDINAWESHYVPASNREGLQVQDLFPRIFGHEASGIVESVGEGVTEFTVGDHVLTVFIGECKSCKQCKSGKSNICQVLGLERRGVMHSDQKTRFSVQGKPIYHYCAVSSFSEYTVVHSGCAVKISPELPLEKLCLLSCGLAAGLGAAWNVADISKGSTVVIFGLGTVGLSIAQGARIRGASRIIGVDNNPKKHEIAKDFGITEFLNPSSYNEPIQQVIKRMTDGGADYSFECVGNTEIVTTALQSCCDGWGSTITLGVPKLKPEVSAHYGLFLLGRTLKGTLFGGWKPKSDLPSLVHMYQRKEIQVDEYISHNLPFECINEAFNLMKEGKCLRCVILMPQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00232 387 SMART PKS_ER_names_mod 16 383 IPR020843 GO:0016491
Pte9g00232 387 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Pte9g00232 387 CDD alcohol_DH_plants 7 383 - -
Pte9g00232 387 Pfam Zinc-binding dehydrogenase 214 341 IPR013149 -
Pte9g00232 387 FunFam Alcohol dehydrogenase 6 12 205 - -
Pte9g00232 387 Gene3D - 190 328 - -
Pte9g00232 387 FunFam S-(hydroxymethyl)glutathione dehydrogenase 190 328 - -
Pte9g00232 387 SUPERFAMILY GroES-like 336 384 IPR011032 -
Pte9g00232 387 SUPERFAMILY GroES-like 4 195 IPR011032 -
Pte9g00232 387 Gene3D - 12 380 - -
Pte9g00232 387 Pfam Alcohol dehydrogenase GroES-like domain 34 170 IPR013154 -
Pte9g00232 387 PANTHER ALCOHOL DEHYDROGENASE 6 383 - -
Pte9g00232 387 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 175 348 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00232 Pte-Chr9 2634653 2639397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00232 35 185 Monolignol Biosynthesis Gene Families AT4G37970 28.205 4.70e-10 58.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00232 9 2634653 2639397 Pte9g00232 9 2634653 2639397 RCT