Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00231 ATGGCACCAGTTGGATTACCTCCTGGTTTTAGGTTTCATCCTACTGACGAAGAACTAGTGAATTACTACCTTAAGAGGAAGATTCATTGCCAAGAGATTGAGCTTGACATCATTCCTGAAGTTGATCTTTACAAATGTGAGCCATGGGAGTTAGCAGAAAAATCATTTTTGCCAAGTAGAGATCCAGAATGGTACTTCTTTGGACCAAGGGATAGGAAGTACCCAAATGGGTTCAGAACAAACAGAGCAACCAGAGCTGGATATTGGAAATCCACAGGTAAAGACAGAAGGGTTATAAGCCAGAGCAGAGCCATTGGAATGAAGAAGACTTTGGTTTACTACAGAGGTCGTGCTCCTCAGGGCATTAGAACCGATTGGGTAATGCATGAGTACAGACTTGATGATAAAGAATGCGAAGACACCTCAGGAATTCAGGATACGTATGCATTGTGTCGTGTGTTTAAGAAAAATGGGATCTACTCTGAGATTGAAGACCAAGGGCAATGCAGTTTGTCTCTGATTGAGACATCACAACATAACATCATTAGTGAAAGCGAAACCATGTCCCCAGACATTCCAATGGCGTCACCCTCATGCTTAGAAGAGGAAGACAAGGATGATTCATGGATGCAGTTTATCACAGATGATGCATGGTGTTATCCTCATGCAAACATGGATAGTGGAGAAGGAATATCTCATGTGACATTCACAAACCAATGA 720 0.4208 MAPVGLPPGFRFHPTDEELVNYYLKRKIHCQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVISQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTSGIQDTYALCRVFKKNGIYSEIEDQGQCSLSLIETSQHNIISESETMSPDIPMASPSCLEEEDKDDSWMQFITDDAWCYPHANMDSGEGISHVTFTNQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00231 239 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 185 - -
Pte9g00231 239 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Pte9g00231 239 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pte9g00231 239 FunFam Nac domain-containing protein 86 15 159 - -
Pte9g00231 239 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Pte9g00231 239 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00231 Pte-Chr9 2630975 2633758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00231 1 231 NAC Transcription Factor Family AT3G17730 74.390 3.87e-130 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte9g00231 NAM 1.7e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00231 - - gmx:100784495 435.261