Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00208 ATGCTCTCTTTTCAGAACCAGCTGGAATCACCACAATCCTTCGGCTTTAAGGTTCCAACCCTAACACCAGTATTCTTGGAGAATACTCAATTGCCAAAGGTGGAACAAGTCCCTTCGTCCTCCAATACTGAAGAGTGTGAGTTAGGAAACAAAAACGATATTCATTTCGCCAGGCCTGGCTCCTCAAGAACTCCTATACGTGGCAAAGACCACATAATTGCAGAGAGAAAGAGAAGGCAGAAGATAACTCAGACGTTAATTCAACTTTCAGCCCTTGTTCCTGGACTAAAGAAGCTAGACCAGAGGTCTGTTCTCTTTGACGCCATCCAATATGTGAAGCAACTTCAAGAGCGTATCAAATATCTTGATGAGAGGACCAAAAAGATGACCATAGAATCAGTTGTCTTGAGGCAAAAACCTAAGGCACGTGCTGATAAACAAGCCTCGGACAGTACATCTTGTATTACTTACTTGGAAAAATCCGATCCCCTTGGCAATGAGAAGACACTCCCCGAGGTTCAAGCCAGAGTGTCAGCAAGGGATGTACTTATTCGAATCCAGTGCAAACGATTTAAAGGGCAGGTAGCAAATATTCTTAGGGAGATCGAAAATCAACATCTCTTAGTTATCAACAGCATTGTCTTGCCCTTCGGAACAGCCATACTTGAGATAATAATAATTGCTCAGATGGAAGATGAATTCTGCACGACGGTGAAGGATTTAGCTAAAAGCCTCCGACAAGTGTTATAG 750 0.4293 MLSFQNQLESPQSFGFKVPTLTPVFLENTQLPKVEQVPSSSNTEECELGNKNDIHFARPGSSRTPIRGKDHIIAERKRRQKITQTLIQLSALVPGLKKLDQRSVLFDAIQYVKQLQERIKYLDERTKKMTIESVVLRQKPKARADKQASDSTSCITYLEKSDPLGNEKTLPEVQARVSARDVLIRIQCKRFKGQVANILREIENQHLLVINSIVLPFGTAILEIIIIAQMEDEFCTTVKDLAKSLRQVL* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00208 249 Gene3D - 61 132 IPR036638 GO:0046983
Pte9g00208 249 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 66 115 IPR011598 GO:0046983
Pte9g00208 249 Pfam Helix-loop-helix DNA-binding domain 70 116 IPR011598 GO:0046983
Pte9g00208 249 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 71 135 IPR036638 GO:0046983
Pte9g00208 249 Coils Coil 112 132 - -
Pte9g00208 249 PANTHER BHLH TRANSCRIPTION FACTOR 37 249 - -
Pte9g00208 249 SMART finulus 72 121 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00208 Pte-Chr9 2409055 2410039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00208 22 249 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.348 1.46e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g00208 HLH 2.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00208 - - tcc:18611378 197.978