Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00202 ATGTACTCATTGGTTTCTTCGACTGCCAGCATTTATATGGCTTTCCACTTGCAGGACCCTCTCTGTCTCTGTAAACTTACAGCTAACGAATCAGATGACTACAGTTTTCTTGAACAAGGGGAAGTCAACCCTATCGGTTCAGAATTGTTTCCAATAGAAGAATCACTGCATGAGTTGCTAAGAGATCATCATGAGATTGAACTATCAGAGAGGCATTCCCACAAAGATGAGAGCGAATTCAAGAGGCCAGCTAAGCGCCACACTAGCAGCTTAAACTCTCCCATACTTGACAACGTTGTTTCCAATCAGCAACAACCCTCTTCTTCTTCATCGTACATGCTCTCTTTTCAGAACCAGCTGGAATCACCACAATCCTTCGGCTTTAAGGTTCCAACCCTAACACCAGTATTCTTGGAGAATACTCAATTGCCAAAGGTGGAACAAGTCCCTTCGTCCTCCAATACTGAAGAGTGTGAGTTAGGAAACAAAAACGATATTCATTTCGCCAGGCCTGGCTCCTCAAGAACTCCTATACGTGGCAAAGACCACATAATTGCAGAGAGAAAGAGAAGGCAGAAGATAACTCAGACGTTAATTCAACTTTCAGCCCTTGTTCCTGGACTAAAGAAGCTAGACCAGAGGTCTGTTCTCTTTGACGCCATCCAATATGTGAAGCAACTTCAAGAGCGTATCAAATATCTTGATGAGAGGACCAAAAAGATGACCATAGAATCAGTTGTCTTGAGGCAAAAACCTAAGGCACGTGCTGATAAACAAGCCTCGGACAGTACATCTTGTATTACTTACTTGGAAAAATCCGATCCCCTTGGCAATGAGAAGACACTCCCCGAGGTTCAAGCCAGAGTGTCAGCAAGGGATGTACTTATTCGAATCCAGTGCAAACGATTTAAAGGGCAGGTAGCAAATATTCTTAGGGAGATCGAAAATCAACATCTCTTAGTTATCAACAGCATTGTCTTGCCCTTCGGAACAGCCATACTTGAGATAATAATAATTGCTCAGATGGAAGATGAATTCTGCACGACGGTGAAGGATTTAGCTAAAAGCCTCCGACAAGTGTTATAG 1086 0.43 MYSLVSSTASIYMAFHLQDPLCLCKLTANESDDYSFLEQGEVNPIGSELFPIEESLHELLRDHHEIELSERHSHKDESEFKRPAKRHTSSLNSPILDNVVSNQQQPSSSSSYMLSFQNQLESPQSFGFKVPTLTPVFLENTQLPKVEQVPSSSNTEECELGNKNDIHFARPGSSRTPIRGKDHIIAERKRRQKITQTLIQLSALVPGLKKLDQRSVLFDAIQYVKQLQERIKYLDERTKKMTIESVVLRQKPKARADKQASDSTSCITYLEKSDPLGNEKTLPEVQARVSARDVLIRIQCKRFKGQVANILREIENQHLLVINSIVLPFGTAILEIIIIAQMEDEFCTTVKDLAKSLRQVL* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00202 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 247 IPR036638 GO:0046983
Pte9g00202 361 Gene3D - 173 243 IPR036638 GO:0046983
Pte9g00202 361 Pfam Helix-loop-helix DNA-binding domain 182 228 IPR011598 GO:0046983
Pte9g00202 361 Coils Coil 224 244 - -
Pte9g00202 361 MobiDBLite consensus disorder prediction 67 86 - -
Pte9g00202 361 SMART finulus 184 233 IPR011598 GO:0046983
Pte9g00202 361 PANTHER BHLH TRANSCRIPTION FACTOR 62 361 - -
Pte9g00202 361 MobiDBLite consensus disorder prediction 67 95 - -
Pte9g00202 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 178 227 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00202 Pte-Chr9 2242250 2243735 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00202 109 361 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 42.353 5.39e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g00202 HLH 5.1e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00202 - - zju:107424976 206.838