Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00195 ATGTCGGAGAAACAAGCCTCTCTGGATTTCAAGTGCAGGAAGATTCTTGGTGGAGTTGACGAGAAATCAATTGTTTGTCAGACACCTGAGAAAATAAGTGAGCCTTTGCATTCAAAGTCTAATGCGGGAAAAATCCTAGTTCCAGACAAGTACAAGGCTCTAGCGATCTTGTTTGACAGCATGAATTGTTCGTTGAGGTTACTTAATCTATGTCAAAAGAGTGCAACTTTTAAGAATGTGAGTACTCAAGTTGAAAGTTTGTCCAAAAGGAAATTTTTATACAAGCATCTTGCACAGATAATTTATATTCTTCCAGAGGTGGTGCTAGTTCATAAGATACTTGTTCATGACAAGAAAACCTTGTGCATGAAGCCTGATATCAAGATTACGTTGTCATTTGATGTTGTGAATGGTCACTGTGAAGAATCTCCTTACACGGCTCTACGGAAAGTTTTTGCTTCTAGACTTATAGACTTTTCTGTTGAGCATCCTCAGGCAACTGATGTACCCGAGGCCAAACTGCCAGAGCCCTTCTGTAAAAGTTTCCTTGATACCATTGAGGATACGACTGGAGATTCATTCTTAAAGTCTCCTTCACTTGAGGAGGTAGAAGAGAGGTTTGATCCATATGTCAATGAATTTTGTAATAGAAGCAAACAGCAGAAAGATTCAACTGTATCATCGTATTCAAAATGTTATGACTTGTCCATCCAGGAGACTGAAACCGACCTAAAGAAGGAAGCATCTTCCACAAGCTCCAAACCCCATCCTAGTTGTCCTGTTCAACTGATTTCCACTGAATCACATGTTGTTTCTAGTAGTTCTACCTCTGAAAGCCCAGCAGTTAAATTTAATTTAAATTCTGATAATGTAATGACAGAGACCCCTGTACAGTCTACACCAAGGAGATTAATTCCAACTCCTGATGTCCATACTAAGGTTGATACTCCTGGTCACCAATTGAAATCATCTAGTAAGCCTGCTAAAAGAGTCCTCGATTTCTCACGTTCTGAAGTAGATGAAACCGTGGCAGAAAAAATTGGTTTTAGTAGCATGTCTCAAACAACAAGGGGATTTATTTTGGATGATGAAGTCAATAAATCTATCCCATCCAAACAGGTGCAAGATAGTAGTTGTTGCTTTCATGACGTCAGCAACAAGATCAAAGCAGAACTAGGAAGAAACCAGCAAATATCTTCCTTGTCTGACTTGGTTGCCGTGATTCATTCTGTATTTGTGTCTGTAAGCTGCACTACAATCACGAAGGAGGAACTTCTACACAAGATCATCATGAATAGTCTTGATTTCACCGACCAAAGGGAAGCTGAGGAGCAGGTTGAGCTTCTTGAGAAAGTGGTTCCACATTGGATATGTAAGAAGCTGTTACCTAGTGGTGATATTATATACAGCATTGATAGATCATCAAATTTGGATTCTGTCCAGTCAAGGCTTTTAATCATGTAA 1464 0.3934 MSEKQASLDFKCRKILGGVDEKSIVCQTPEKISEPLHSKSNAGKILVPDKYKALAILFDSMNCSLRLLNLCQKSATFKNVSTQVESLSKRKFLYKHLAQIIYILPEVVLVHKILVHDKKTLCMKPDIKITLSFDVVNGHCEESPYTALRKVFASRLIDFSVEHPQATDVPEAKLPEPFCKSFLDTIEDTTGDSFLKSPSLEEVEERFDPYVNEFCNRSKQQKDSTVSSYSKCYDLSIQETETDLKKEASSTSSKPHPSCPVQLISTESHVVSSSSTSESPAVKFNLNSDNVMTETPVQSTPRRLIPTPDVHTKVDTPGHQLKSSSKPAKRVLDFSRSEVDETVAEKIGFSSMSQTTRGFILDDEVNKSIPSKQVQDSSCCFHDVSNKIKAELGRNQQISSLSDLVAVIHSVFVSVSCTTITKEELLHKIIMNSLDFTDQREAEEQVELLEKVVPHWICKKLLPSGDIIYSIDRSSNLDSVQSRLLIM* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00195 487 SMART CDT1_2 47 176 IPR014939 -
Pte9g00195 487 Pfam DNA replication factor CDT1 like 48 111 IPR014939 -
Pte9g00195 487 Gene3D - 389 486 IPR038090 -
Pte9g00195 487 PANTHER DNA REPLICATION FACTOR CDT1 37 484 IPR045173 GO:0003677|GO:0030174|GO:0071163
Pte9g00195 487 MobiDBLite consensus disorder prediction 292 327 - -
Pte9g00195 487 CDD Cdt1_m 28 177 IPR014939 -
Pte9g00195 487 Pfam DNA replication factor Cdt1 C-terminal domain 389 457 IPR032054 -
Pte9g00195 487 SUPERFAMILY "Winged helix" DNA-binding domain 38 178 IPR036390 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00195 41 484 Core DNA Replication Machinery Family AT2G31270 32.427 4.20e-46 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00195 K10727 - cave:132185685 364.385