Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00193 ATGTCCGTATCATTTACACTTTTTGCTGGATATTCTGCCAACTTTTGGGAAATAATCAAAGAAAATAAATGTGATATCAAAAGGTCAAAGACAATTTCCATAGCTGGCCACTACCAATTCAACGGTGATATACAATCTGGAACTTTAGTCCAGTCGAAGCATACAATTTCTTCGCTCAAGGTGAGGAAGCCTTACACCATCACTAAGCAAAGGGAGAAATGGACTGAAGAAGAGCATGGGAAGTTTCTTGAAGCTCTGAAACTGTATGGCCGGGGTTGGCATCAAATAGAAGAACATGTAGGTACCAAAACTGCAGTTCAGATTCGAAGTCATGCTCAAAAGTTCTTTGCGAAGCTAGAGCGTGAGTCAAATGGTAGTGCTGACAACTCCATTCAATCAGTTGTATTTCCTCCTCCTCGGCCTAAGAGAAAGCCTCTACATCCATATCCTCGCAAGCTGGTTGATTGTTCTCACGGGATCTCAATTTTGAACAAACAGGAAAGATCTCCATCTCCTAACCTGCTGGTAGCAGAACGAGAAACTCGTTCTCCAACTTCTGTTTTATCTAGACTTGATTCAGTGTCCTATGAGTCTGTCGTACCAGAACAAACTGTTAGATCTCTTTCACCAAGTTCCCCTCAAATCGAAATGCATTCAATGAGAAAATCACATTTTGAAAACGATAATGATTACATGACTTCGACCTCATATGAAGAAGGGAAAGCACTTTGGTCATCAGTTCCCCAATCTGGTGGTGCAAGCTTGGAGAACCTTTTCTCTATGAAGTTTGAATCCGATTCCGTGGGAACTGATTATTCTAAAGAAACTTCTGAAAACAATCAACCATCCACCGGCATCAAGCTATTTGGCAAGACAATATTCATCTATGAGAAGCCATGGAGAGTCGATGATGAGAATCTCAAGTCAGTTGCATGTATGCTTAGTCAGGGAAATCATGTGTTTGATAAAGAACAGCTTGGCCTAGAACCGCAACCACATCTAGATGTACATTTATCACCATCAGGTGGAGACAACATGAATTCCATGGAAGATCAGCAAGAGATGTTGTTCAATGTAGGATCTGTTGCTAAGGTTTCTCTGCCAGGTTGGACTTGTCACAAAAGATTATCAACATTACACTCTTAA 1146 0.4092 MSVSFTLFAGYSANFWEIIKENKCDIKRSKTISIAGHYQFNGDIQSGTLVQSKHTISSLKVRKPYTITKQREKWTEEEHGKFLEALKLYGRGWHQIEEHVGTKTAVQIRSHAQKFFAKLERESNGSADNSIQSVVFPPPRPKRKPLHPYPRKLVDCSHGISILNKQERSPSPNLLVAERETRSPTSVLSRLDSVSYESVVPEQTVRSLSPSSPQIEMHSMRKSHFENDNDYMTSTSYEEGKALWSSVPQSGGASLENLFSMKFESDSVGTDYSKETSENNQPSTGIKLFGKTIFIYEKPWRVDDENLKSVACMLSQGNHVFDKEQLGLEPQPHLDVHLSPSGGDNMNSMEDQQEMLFNVGSVAKVSLPGWTCHKRLSTLHS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00193 381 CDD SANT 73 116 IPR001005 -
Pte9g00193 381 FunFam protein REVEILLE 6 isoform X1 73 121 - -
Pte9g00193 381 SUPERFAMILY Homeodomain-like 65 121 IPR009057 -
Pte9g00193 381 Gene3D - 73 119 - -
Pte9g00193 381 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Pte9g00193 381 Pfam Myb-like DNA-binding domain 71 114 IPR001005 -
Pte9g00193 381 MobiDBLite consensus disorder prediction 122 150 - -
Pte9g00193 381 SMART sant 70 118 IPR001005 -
Pte9g00193 381 ProSiteProfiles SANT domain profile. 69 124 IPR017884 -
Pte9g00193 381 PANTHER SWI/SNF COMPLEX-RELATED 54 310 - -
Pte9g00193 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Pte9g00193 381 NCBIfam myb-like DNA-binding domain, SHAQKYF class 69 118 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00193 Pte-Chr9 2051685 2055088 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte9g00193 Myb_DNA-binding 1.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00193 - - tcc:18604492 260.381