Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00192 ATGAGTGTTATCTTGTCACAAATACAGTGTAAGTGGAGATTTGGACTGTGTAGAGGAATGAGAATTCAATCAAAGGAGGTGAAAGTGCTAATGCTTCGTTTGATTGTGTCATCTATGGAGTACGGCAGTGGAGGCGGTGGTTCCGGTGGGGACCATCACCATGATTCGTCTGATTCTCAGAGAAGGAAGAAGCGCTACCATCGTCACACTACTCACCAGATTCATAGGCTTGAAGCGATGTTCAAAGAGTATCCCCACCCAGATGAGAAGCAGAGGACTCAGTTAAGCAGAGAATTAGGCTTAGCTCCACGACAAATCAAATTTTGGTTTCAGAACAGGAGAACGCAGATGAAGGCCCAACATGAAAGAGCCGATAACTTTGCTCTCCGGGCAGAAAACGACAAGATACGATGTGAAAACATAGCAATCAGAGAGGCATTGAAAAATGTCATTTGCCCCACTTGTGGTGGCCCTCCTCTCAACGAAGATAGCTACTTTGATGAACAAAAGTTAAGAATCGAGAATGCCCAACTCAAAGAAGAGCTTGATAGAGTATCTAGTATTGCTGCCAAGTACATGGGAAGACCATTTTCCCAGTTCCCACCAGTTCAACCAATTCATATGTCTTCATTGGACTTGACAATGGGGAGCTTCGGAAATCACGGAATGCCGGGCCTTTCTCTTGATCTTGATCTTCTTCCAGGGAGTTCTTCCACAATGCCAAGTTTGCCTTTTCAGCCTGCTTGCCTTTCAGACATGGACAAGTCCCTCATGACAGACATTGCTGCCACTGCAATGCAAGAACTTCTGAGGCTTCTGCACGATGAACCTCTATGGATGAAGTCAAGCACTGGAAGGGAAGTTCTCAATTTTGAGACTTATGAAAGAATATTTCCAAGGACAAGTCAACTGAAAAATCCAAACGTTCGGATTGAAGCTTCTCGAGATTCAGGAGTCGTGATCATGAATGGTTTGGCGTTGGTTGACATGTTTATGGACTCAAACAAATGGATGGATCTATTTCCCACGATTGTCTCAATGTCAAAAACAATCGAAGTTATCTCAAACGGCGTGATGGGTGGTCATAATGGTGCTTTGCTGCTGATGTATGAAGAGCTGCAAGTGCTTTCACCACTTGTTCCAACAAGGGAGTTCTATGTACTTCGTTACTGCCAGCAAATTGAGCAAGGCTTGTGGGCAATTGTGGATGTTTCTTATGATTTTCATCAAGAAAACCAGTTTTCATGTCAACCAAGATCTCGCAGGCTTCCTTCTGGATGCATGATCCAGGACATGCCAAATGGCTATTCTAAGGTTACTTGGGTTGAACATGTTGAAATAGAAGATAAGACGGCAGTTAATCGGCTGTATAGGGATCTGATTTATAGTGGTTTGGCCTTTGGAGCTGGAAGATGGCTGGCTACTCTTCAGAGGATGTGTGAAAGATTTGCTTGCCTAATGGTTTCTGGTACTTCTACTCGTGATCTTGAAGGAGTAATTCCATCTCCGGAAGGCAAGAGGAGCTTGATGAAACTTGCACAGAGGATGGTCAACTACTTCTGTGCAAGCATTAGCTTGTCAAACGGTCACCGATGGACAACACTCTCCGGCTTAGACGAGGGAGTCAGAATCAATATACAAAGGAGTACAGATCCTGGCCATTCTAATGGTATGGTGCTTGGTGCAGCAACTACTATATGGCTCCCAGTTTCTCCACAAAATATCTTTAACTTCTTCAAGGATGAAAGAAACCGATCTCAGTGGGATGTTTTATCCAACGGCAATTCAGTACAAGAAGTTGCTCATATAGCAAATGGATCACATCCTGGAAACTGCATTTCTGTACTAAGGGCTTTCAATACAAGTCAGAACAACATGCTGATACTACAAGAGAGCTGCATAGATTCATTTGGTTCAATGGTAGTCTATTCTCCAGTGGATTTACCAGCCATCAATGTAGCAATGAGTGGTGAGGACCCTTCATACATTCCATTGCTACCATCAGGATTTACTATCTCACCAGATGGTCAAACAGACCGCGGAGATGGAGCTTCATCGAGCTCACATACACATGGTAGCATGGGGAGGTCATCCGGTGGTTCACTGATCACAGTGGCATTTCAAATATTAGTGAGCAACTTGCCATCTGCAAGGCTGAACTTGGAGTCAGTTACTACTGTCAATAACCTTATCGGCAGCACTGTCCAGCAAATCAAGTCTGCCTTGAATTGTTCTACTTCCTGA 2244 0.4403 MSVILSQIQCKWRFGLCRGMRIQSKEVKVLMLRLIVSSMEYGSGGGGSGGDHHHDSSDSQRRKKRYHRHTTHQIHRLEAMFKEYPHPDEKQRTQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNFALRAENDKIRCENIAIREALKNVICPTCGGPPLNEDSYFDEQKLRIENAQLKEELDRVSSIAAKYMGRPFSQFPPVQPIHMSSLDLTMGSFGNHGMPGLSLDLDLLPGSSSTMPSLPFQPACLSDMDKSLMTDIAATAMQELLRLLHDEPLWMKSSTGREVLNFETYERIFPRTSQLKNPNVRIEASRDSGVVIMNGLALVDMFMDSNKWMDLFPTIVSMSKTIEVISNGVMGGHNGALLLMYEELQVLSPLVPTREFYVLRYCQQIEQGLWAIVDVSYDFHQENQFSCQPRSRRLPSGCMIQDMPNGYSKVTWVEHVEIEDKTAVNRLYRDLIYSGLAFGAGRWLATLQRMCERFACLMVSGTSTRDLEGVIPSPEGKRSLMKLAQRMVNYFCASISLSNGHRWTTLSGLDEGVRINIQRSTDPGHSNGMVLGAATTIWLPVSPQNIFNFFKDERNRSQWDVLSNGNSVQEVAHIANGSHPGNCISVLRAFNTSQNNMLILQESCIDSFGSMVVYSPVDLPAINVAMSGEDPSYIPLLPSGFTISPDGQTDRGDGASSSSHTHGSMGRSSGGSLITVAFQILVSNLPSARLNLESVTTVNNLIGSTVQQIKSALNCSTS* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00192 747 CDD START_ArGLABRA2_like 255 481 - -
Pte9g00192 747 ProSiteProfiles 'Homeobox' domain profile. 60 120 IPR001356 GO:0003677
Pte9g00192 747 Pfam Homeodomain 63 118 IPR001356 GO:0003677
Pte9g00192 747 Gene3D - 258 466 IPR023393 -
Pte9g00192 747 SMART HOX_1 61 124 IPR001356 GO:0003677
Pte9g00192 747 SUPERFAMILY Homeodomain-like 40 120 IPR009057 -
Pte9g00192 747 CDD homeodomain 63 121 IPR001356 GO:0003677
Pte9g00192 747 MobiDBLite consensus disorder prediction 43 70 - -
Pte9g00192 747 FunFam Homeobox-leucine zipper protein HDG1 50 136 - -
Pte9g00192 747 SUPERFAMILY Bet v1-like 503 739 - -
Pte9g00192 747 ProSitePatterns 'Homeobox' domain signature. 95 118 IPR017970 GO:0000981|GO:0006355
Pte9g00192 747 SUPERFAMILY Bet v1-like 252 483 - -
Pte9g00192 747 Coils Coil 168 188 - -
Pte9g00192 747 MobiDBLite consensus disorder prediction 674 697 - -
Pte9g00192 747 SMART START_1 260 482 IPR002913 GO:0008289
Pte9g00192 747 Gene3D - 49 133 - -
Pte9g00192 747 FunFam Homeobox-leucine zipper protein GLABRA 2 260 481 - -
Pte9g00192 747 Pfam START domain 263 482 IPR002913 GO:0008289
Pte9g00192 747 ProSiteProfiles START domain profile. 251 485 IPR002913 GO:0008289
Pte9g00192 747 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 60 743 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00192 Pte-Chr9 2039492 2043837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00192 58 747 Homeobox Transcription Factor Family AT1G73360 64.773 0.0 909
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte9g00192 START 3.3e-45 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00192 K09338 - tcc:18587139 1154.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00192 9 2039492 2043837 Pte9g00192 9 2039492 2043837 RCT