Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00184 ATGTGCACAAGAGGGCACTGGAGACCTGCTGAAGATGAGAAACTTAGGGAGTTGGTGGAACGTTATGGACCTCATAACTGGAACGCCATAGCTGAAAAGCTTAGAGGAAGATCAGGGAAGAGTTGTAGGTTAAGATGGTTTAATCAATTGGACCCAAGAATAAACAGAAGTCCTTTCACAGAGGAGGAAGAAGCACGCCTGATAGCTTCTCATAGGATTCATGGCAACAGATGGGCTGTCATTGCAAGGCTTTTCCCAGGGAGAACCGATAATGCAGTAAAAAACCATTGGCACGTAATGATGGCAAGACTACGAAGAGAACGATCCAAGCTTTATGATAAAAAGCCTGTCCAGATGACGAAGTTCTCTTCGGAATCAGTTCATGATCGTCAGGATCCACAGAATTACGATCAGTCAAGTGATCACGGTGCTTCCTCTTTTGTTGATGAGAGACACTATGCAGGATACATCTGTCCTTCAGTCTCCTATAACCCTTTCCTGTTTCACCTGCAAAACCACTTTCATCAAAACCCTAGTTCTCCTTCCACATTGCATCAAGATAAAAGCCAGTTCTATGACTTTCTTCAAGTAAATGCAGAGTCAAATAGGAGTGAACTGACAGATAGTGCAAGAAGAGACGAGGATGAAGTTGACCAGGCAACTATGGAACAAAATCGAAAGGGTAGTGCTAAATTGATAGACTTCTTGTCTGTTGGAAAGTCTTAG 726 0.4311 MCTRGHWRPAEDEKLRELVERYGPHNWNAIAEKLRGRSGKSCRLRWFNQLDPRINRSPFTEEEEARLIASHRIHGNRWAVIARLFPGRTDNAVKNHWHVMMARLRRERSKLYDKKPVQMTKFSSESVHDRQDPQNYDQSSDHGASSFVDERHYAGYICPSVSYNPFLFHLQNHFHQNPSSPSTLHQDKSQFYDFLQVNAESNRSELTDSARRDEDEVDQATMEQNRKGSAKLIDFLSVGKS* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00184 241 Gene3D - 4 55 - -
Pte9g00184 241 PANTHER MYB PROTEIN-RELATED 4 171 - -
Pte9g00184 241 MobiDBLite consensus disorder prediction 118 144 - -
Pte9g00184 241 Gene3D - 57 139 - -
Pte9g00184 241 SUPERFAMILY Homeodomain-like 4 97 IPR009057 -
Pte9g00184 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Pte9g00184 241 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Pte9g00184 241 Coils Coil 203 223 - -
Pte9g00184 241 Pfam Myb-like DNA-binding domain 7 67 - -
Pte9g00184 241 SMART sant 55 103 IPR001005 -
Pte9g00184 241 SMART sant 3 52 IPR001005 -
Pte9g00184 241 MobiDBLite consensus disorder prediction 205 222 - -
Pte9g00184 241 ProSiteProfiles Myb-like domain profile. 4 50 IPR001005 -
Pte9g00184 241 CDD SANT 7 48 IPR001005 -
Pte9g00184 241 CDD SANT 58 101 IPR001005 -
Pte9g00184 241 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Pte9g00184 241 FunFam MYB transcription factor 4 55 - -
Pte9g00184 241 MobiDBLite consensus disorder prediction 202 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00184 Pte-Chr9 1985673 1987723 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00184 1 241 MYB Transcription Factor Family AT1G17950 52.471 1.80e-81 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte9g00184 Myb_DNA-bind_6 1.8e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00184 K09422 - qsa:O6P43_005257 327.02