Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00180 ATGGCTGCTGACAACTCCTCTGCCACATATATATTTTGTGCAACTACCTGCAACACAGCGAATGCCCGTTACATCACAACACAAGCCACGAAGCCCATGGCTTCTTTCTCACCACAGCCTTTCTCTGCTTCACTCTCTGCATCGTCCTCTTCTTTCGTTTCTTCCTCTCTGGACTTTCAACGATCTTTGTCGTTTCTCTTCAAGGCCAAACCTTCGTGCAACCTCAACAAGTCTCCTTTAGTCTGCAGGGCATCATGGCAAGAGCTTGCGGGAGTTTTAGTGTTCTCGGCCATTCCTTTCACAGCAGTGAAAGCCATAGCGAACAGTCCACTGGGAGAGTCTCTCAAGACAAGATTAGAGGAAAGGAAGAAATTGGCTGTGGAAAACTCTTCCAAGTTCAAGGCCTTAGCAGACAAGGCCAAAAAAGAGAGCTTCTGGTATGGAGAAGAGAGGCCACGGTGGCTTGGTCCTATTCCTTACGATTACCCAGAATATCTGACTGGAGAATTACCTGGGGATTATGGCTTTGACATTGCTGGCCTAAGCAAGGATCCAGTGGCTTTAAAGAAGTATTTCAACTTTGAGGTACTTCACGCTCGGTGGGCTATGCTTGCATCCCTTGGCGTGCTGGTTCCAGAAATATTAGACTTGTCAGGGGCTTTTCACTTTGTTGAACCAGTCTGGTGGCGAGTTGGCTATTCAAAACTTCAGGGAGAGACTCTGGATTATCTTGGCATCCCAGGACTTCACCTGGCTGGAAGCCAAGGAGTTATTGTCATTGCAATTTGTCAGGCACTTCTTATGGTTGGACCCGAGTACGCAAGATATTGTGGAATTGAAGCATTGGAACCTCTAGGGATTTATCTTCCTGGTGATATAAATTATCCCGGAGGGGCATTGTTTGATCCCTTGAATCTGACTAAAGATCCAGCAGGCTTTGAGGAGCTGAAAGTGAAAGAGCTAAAAAATGGACGGTTGGCAATGATTGCGTGGTTAGGTTTTTACTCTCAAGCAGCTTTAACTGGAAAAGGTCCTGTACAAAATCTCTTAGAGCACGTCTCTGATCCATTCCATAATAACTTGCTCTCCATGCTCAGTGCCAAGTGA 1107 0.4625 MAADNSSATYIFCATTCNTANARYITTQATKPMASFSPQPFSASLSASSSSFVSSSLDFQRSLSFLFKAKPSCNLNKSPLVCRASWQELAGVLVFSAIPFTAVKAIANSPLGESLKTRLEERKKLAVENSSKFKALADKAKKESFWYGEERPRWLGPIPYDYPEYLTGELPGDYGFDIAGLSKDPVALKKYFNFEVLHARWAMLASLGVLVPEILDLSGAFHFVEPVWWRVGYSKLQGETLDYLGIPGLHLAGSQGVIVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLTKDPAGFEELKVKELKNGRLAMIAWLGFYSQAALTGKGPVQNLLEHVSDPFHNNLLSMLSAK* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00180 368 Pfam Chlorophyll A-B binding protein 163 338 IPR022796 -
Pte9g00180 368 Gene3D Chlorophyll a/b binding protein domain 153 365 - -
Pte9g00180 368 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 122 364 IPR001344 GO:0009765|GO:0016020
Pte9g00180 368 FunFam Chlorophyll a-b binding protein, chloroplastic 153 365 - -
Pte9g00180 368 SUPERFAMILY Chlorophyll a-b binding protein 145 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00180 Pte-Chr9 1921023 1923921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00180 68 366 Chloroplast and Mitochondria Gene Families AT1G76570 78.595 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00180 K14172 - qsa:O6P43_026657 557.755