Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00164 ATGGCAGTGGTTCGAGAACGCCGCAACCTTAACCTCCGTCTTCCTCTGCCTGAACCTTCAGAACGCCGTCCACGATTCCCTCTTCCCCTTCCACCGTCGTCTGCTTCAACCACCACAACTTCTTCCATAGCTGCAACTGACATTGAAAAGCTTCATGTTCTTGGCCACGGCAATGGTGGCACAGTCTACAAAGTACGTCACAAGCGTACTAACTCTATCTACGCTCTTAAAGTTGTCCATCCTGACTCAGAGCCCACGACCCGCCGTCAAGTTCTCAGAGAGATGGAGATCCTCCGCCGTACCGACTCGCCCTTCATCGTTCACTGCCATGGTTTCTTTGATAAACCTTCAGGTGATATAGAGATACTGATGGAATACATGGAATTGGGAACGCTAGACCATTTGCTTAAAAGGGATGGAGTTTTCACTGAACTCCAGCTTGCTATGGTGGCGCGTCAGGTTCTTAATGGGTTGAGTTACCTTCACGCGCTGAAGATCATCCACCGTGACATTAAGCCGTCCAATCTTCTAGTAAACAAGAATATGGAAGTGAAGATCAGTGACTTCGGAGTGAGTAAGATAATGTGTAGAACTCTAGAAGCCTGTAACTCATACGTTGGTACTTGCGCGTACATGAGTCCAGAACGGTTCGACCCGGATACATACGGCGGCAGTTATAATGGCTATGCGGGTGATATATGGAGTTTGGGTCTGACCCTTATGGAGCTTTACATGGGTCATTTCCCATTTCTTCCTGCGGGTCAGAGACCCGATTGGGCAACTTTGATGTTTGCTATCTGTTTCGGAGAGCCACCATGCTTGCCGGACGGGGCATCAAATGAATTTCGGAGCTTTATTGAGTGTTGTTTGCAGAAGGAATCAAATAAACGGTGGACGGCAGCTCAACTTTTGACCCACCCGTTTGTGACCAGATATATGTAG 942 0.483 MAVVRERRNLNLRLPLPEPSERRPRFPLPLPPSSASTTTTSSIAATDIEKLHVLGHGNGGTVYKVRHKRTNSIYALKVVHPDSEPTTRRQVLREMEILRRTDSPFIVHCHGFFDKPSGDIEILMEYMELGTLDHLLKRDGVFTELQLAMVARQVLNGLSYLHALKIIHRDIKPSNLLVNKNMEVKISDFGVSKIMCRTLEACNSYVGTCAYMSPERFDPDTYGGSYNGYAGDIWSLGLTLMELYMGHFPFLPAGQRPDWATLMFAICFGEPPCLPDGASNEFRSFIECCLQKESNKRWTAAQLLTHPFVTRYM* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00164 313 SMART serkin_6 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00164 313 Gene3D Transferase(Phosphotransferase) domain 1 124 313 - -
Pte9g00164 313 SUPERFAMILY Protein kinase-like (PK-like) 47 311 IPR011009 -
Pte9g00164 313 Gene3D Phosphorylase Kinase; domain 1 32 123 - -
Pte9g00164 313 CDD PKc_MAPKK_plant_like 47 312 - -
Pte9g00164 313 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 311 - -
Pte9g00164 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Pte9g00164 313 ProSiteProfiles Protein kinase domain profile. 48 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00164 313 FunFam Mitogen-activated protein kinase 2 129 313 - -
Pte9g00164 313 MobiDBLite consensus disorder prediction 14 40 - -
Pte9g00164 313 FunFam Mitogen-activated protein kinase kinase 31 124 - -
Pte9g00164 313 Pfam Protein kinase domain 49 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00164 313 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00164 Pte-Chr9 1784179 1785685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00164 1 309 MAP Kinase Kinase Gene Family AT1G73500 64.839 6.70e-140 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pte9g00164 Pkinase 1.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00164 K20604 - qsa:O6P43_005229 482.641