Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00140 ATGGAGAAAGAGGAGGTGTTGGCAGGAGGTGAGTACAATGGTTGCGAAGGTGGGGAAGCTATTAACATGGCTGCCTGGCTTGTTGGTGTCAAAAACATTGCAATTCATCCTTACCCTCTTCCTTGTTTAGGTCCCCATGATGTCAAAGTTCGGATAAAAGCTTTGGGTATTTGTGGCAGTGATGTTCACTACTTTAAGACAATGAGATGTGCTAGTTTTGTCATGACCAATCCCATGGTTCTGGGACATGAGTCCGCCGGAATGATAGAAGAAATTGGGAGTGAAGTGAAGTCTCTTGCAATTGGGGACCGGGTGGCTTTAGAACCAGGAATCAATTGCCAGCAATGTAACATGTGTTTGCAAGGTCTCTACAATCTCTGTCGTCAGATGAAATTTTTTGGATCTGCTCCGAACAATGGCTGTTTTGCCAATAAGGTGGTGCATCCAGCAAGACTGTGTTTTAAGCTTCCTGACAATGTAACATTGGAGGAAGGAGCAATGTGCGAACCACTGAGTGTGGGTGTGCATGCTTGTCGCCGTGCCAATGTTAGTTCTAACACAACTGTACTGATTGTAGGAGCAGGACCCATTGGCCTCATAGTCTTACTAGTAGCACGAGCATTCCAAGCTACTAGAATCATCATGACTGATATCGATCATCGTCGATTAGCTTTCGCCAAAGAACTCGGTGCAGATGAGGTGATCCAAGTTTCTTCAAGCATCCAGGATGTTGATGAAGAAGTGATGCAGATCAAGAATGCAATGGGTGGGGAAGTTGATATTAGTTTTGATTGCGTAGGCTATAACAAGACCATGTCAACAGCTATAAGTGCCACTCGTTCTGCTGGAAAAGTATGTGCAATTGGATTAGGCCAGAGTGATATGATGACAGTGCCTCTTACTCAAGCAACCATTAGGGAGATTGATGTCATCGGCATATTCCGGTACAGAAACACATGGCCTCTTTGTATTGAGTTACTGCAATCTGGCAAGATTGATGTGAAGCCCCTGATAACCAATAGGTTTGGTTTCTCACAGAAAGAGGTGGTAGAAGCTTTTGAAACCAGTGCTGGCGGAGGCAATGCCATAAAAGTCATGTTTAATTTGTAA 1110 0.4432 MEKEEVLAGGEYNGCEGGEAINMAAWLVGVKNIAIHPYPLPCLGPHDVKVRIKALGICGSDVHYFKTMRCASFVMTNPMVLGHESAGMIEEIGSEVKSLAIGDRVALEPGINCQQCNMCLQGLYNLCRQMKFFGSAPNNGCFANKVVHPARLCFKLPDNVTLEEGAMCEPLSVGVHACRRANVSSNTTVLIVGAGPIGLIVLLVARAFQATRIIMTDIDHRRLAFAKELGADEVIQVSSSIQDVDEEVMQIKNAMGGEVDISFDCVGYNKTMSTAISATRSAGKVCAIGLGQSDMMTVPLTQATIREIDVIGIFRYRNTWPLCIELLQSGKIDVKPLITNRFGFSQKEVVEAFETSAGGGNAIKVMFNL* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00140 369 CDD sorbitol_DH 24 368 IPR045306 GO:0016616
Pte9g00140 369 FunFam Sorbitol dehydrogenase 173 314 - -
Pte9g00140 369 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 82 96 IPR002328 GO:0008270|GO:0016491
Pte9g00140 369 Gene3D - 32 355 - -
Pte9g00140 369 Pfam Zinc-binding dehydrogenase 196 328 IPR013149 -
Pte9g00140 369 SUPERFAMILY GroES-like 24 195 IPR011032 -
Pte9g00140 369 SMART PKS_ER_names_mod 29 367 IPR020843 GO:0016491
Pte9g00140 369 Gene3D - 173 314 - -
Pte9g00140 369 PANTHER SORBITOL DEHYDROGENASE 22 369 - -
Pte9g00140 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 333 IPR036291 -
Pte9g00140 369 Pfam Alcohol dehydrogenase GroES-like domain 45 156 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00140 Pte-Chr9 1525373 1527395 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00140 44 295 Monolignol Biosynthesis Gene Families AT4G39330 25.095 2.75e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00140 K00008 K19635 qsa:O6P43_008279 543.888