LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte9g00136	ATGGGGTTTGAATCAGGAGCTCAAGTTTGCAGCTGTACTGATCACACCCACACCAGAGGCAAGGAATGTGAATATGATGTTTTCTTAAGCTTTCGAGGGGAAGATACCCGTTATGGTTTTACTGGGTATTTATATGATGCTTTGACTAGAAAAGGAATCAATGCATTCATAGATGGTGAGAGTCTTAGAAGGGGTGATGAAATCTCGCCTGCTCTAACGAAAGCCATTGAATGGTCGAGGATTTGTGTCATTGTATTTTCTCAAAACTACGCTTCTTCAACATGGTGTCTGGATGAGCTTGTCAAGATTATCGACTGCATGACGCTCAGAGGACAATGCATTCTGCCTGTCTTTTACCAGGTTGATCCTTCAACAGTACGCCACCAAAGAGATTCGTATGCGAGAGCCATGGCTCAACATGAAATCAAGTTTAGAGATTACATGGACAGAGTTACCAGATGGAGGTCAGCTCTATCCCAAGCTGCCAATTTTTCAGGGTGGCAAGTGAAACACGAATATGAATTTCAATTTGTTGAAAGGATAGTTGAAGAAGTCTCCAGTAGATTGAATCGCCCCATCTTGCATGTTACTACTTATCCTGTTGGATTTGAATCTCGCATATCACAAATCATACCACTATTAGGCCTTGAGTCCAACAATGATGTTCGCATGGTAGGAATCTATGGGATGGGTGGCATTGGAAAATCAACCATAGCAAGAGCAGTGTATAACTTGATTGCTCCTCAATTTGATGGTGCATGTTTCCTTAGTGAAGTCAGAGAGACTTCTTTTGAGAGAGGAGGCTTAGTAGATTTGCAAGAAAAACTTCTCTGTGATATCCTTGGTGGTAAGAACAAGATGGAGTTGGGCAACGTCTACGAAGGAATTCCTGCCATAAGACACAGATTGTCAAATAAAAAAGTTCTTTTGATTCTTGATGATGTAAACAAAGTGAGACAGTTAGAAGCATTAGCCGGAATGCCTGATTGGTTTGGCTATGGTAGTAGAATATTGATAACAACAAGGGATAAGCATCTGTTAACAGCTCACAACGTTACCAGCATATATGAAGTAGAGTTATTAAATAGAGTTGAAGCTTTGGAGCTCTTCAGTTGGCATGCCTTCAGAAAAAGAGAACCAGATTCAATCTACGTGCGTATTTCAGAACGAGTAGTGCATTATGCTGAGCATCTTCCATTAGCCTTAGTCGTAATTGGGGGTGCTTTTATAGGTAGAAGCTTAGAGGAATGGGAAGATGCATTAGGTAAATATAGAAGTGTTCCTGAAGGAGATATCATTGATAAACTGAAAATAAGTTATGATGATTTGGACCATTTTGAGCAAAAGATCTTCCTTGATATTGCTTGTTTCTTCCAGAGGGAAGATCTGAAATACGTGCACACAATATTAAAAGCTTGTGGTTTTGGCCCAACCATTGGCATTACAAAACTTATTCAAAGAAGTCTTTTAACAGTGGAACATGGTGCTATTTGGATGCACAGCATGATAGAGGAGATGGCAAAGGAAATAGTTCGAAGGGAATCACCATCAAATGTTGGAAAAAGAAGCAGATTGTGGTGCCCTGAGGATGTCATTCAAGTTTTAACTGAAAATATAGGAACGAATGCAGTAGAAGGTATCATGTTGGAGTTGCCTGATGTGCCTGAAATGGAAGAGATAGAGTGGAATGGTGAGGCTTTCGTGAAGATGAAGAATCTGAGAATACTCATAATAAGGAATGCATGTTTTTCTACTGCTCCAACTTATCTCCCTAACAATTTGAAAATGCTTCACTGGGAGAACTACCCTTCATCATCTTTTCTACCACCTAGTTTTCATCCAAAGAAACTTGCCATACTCAAAGTCCCTCATAGTCATCTCACATTAATGGAAACGCCATTCGAGAAGTTTGATGCTCTGACTCGCATGAATTTCTCATATTGTGACTTCATAAAGAAATTACCCGACTTGTCTGGAGTGCCAAATTTACAAGTACTTGACCTACAAAGTTGTCGAAATTTGGTTGAGGTTGACAATTCTATTGGATCTCTAGGAAAGCTTGAAAGATTAAATTTCACATGGTGTATTGAACTTACAGCTCTTCCTCAAATATTGAAGCTGAAAAATCTTAAAGAATTTGATCTAGAAGGATGCTCAAAACTTCGTCAATTTCCAGAGATACTTGAACCGATGGAATATCTTTCAGAGATTGGCTTATCGGGAACAGCAATTGAAGAATTGCCATCATCAATTAAATATCTGACTACTTTGCATACATTAGAGGTGGAAAATTGCAGAAGACTGGAGTTTGTTCCACATACCATCGCCCAAATGCAATCACTTGATTGTCTTATCTTTGAAGAAAGTCCACTGATTGGAAATGCTTTTTCACGTTGGGATGAATCTATTGAGAGTTGCTCTACGTCATCATCATCATCATCACCGTCATTGTCATTCAAACTGTCATATTTCAACATTTGCAATAATATTTCACATCTCTTTTTACATGACTGCAATTTACTAGATGAACACCTTCCCTTGATTCCTAAGTTTTTCCCTCAGTTGGAAATTTTGTCTTTAATCAAAAACCAGTTTGAGGCCATTCCAGCTTGCTTCCGAGAATTCCAACGTTTGGAGATCCTGACATTGGATGACTGTAGAAAGCTTCAAGAATTTCCCGATATCCTCTCAGATATGCCAAAATTGAAAAGGATAAGTACAATGAATTGCATGGCTTTGAGCCCACAGTCTGCCGAGTTGTTATTGAAGATCATGGCGAAGAGATTGTTGTGGCCACTTTCTGTTGTATGGGATTATGATCGAACACTGATTGCAGTTCCAAGAGGAAGGTTTCCTGAATTGTTGTTTGCTCATCGTTCGAAGGAAGAAACCATATCCTTTTATGCACGTGGAGACTTTTTGCCACGTTTTCTTTTATGTATTTATTTCGACATGAATGGGAATGGTGGTGGAGGTGATGTGTCACTTTGGTGCACCATGTTTGCATGCATCAATAAATATGAAGCCTCCATGATCTATGAATACTTCATTTGTGAAGATGATAACCAACTATGGCTATTTGATCCCCGAGAGTATGGTAGATTCTGCAGACGTGGATTCGCAGAACATATAAGAAAAATGTGGGATTGTGATGGTTGGAATCATGTCGAAGTTGGTTTCATATTTGGGGATGTCTTTGGTCATAGTATGCCAGGACCATTGGTCAAAGAGTATGGTATTCAGTTCAAAGAAGAAGAAATCAACATGGACAACATTCGCTTTTCACTGCCTTCAGATTTGGAGGAGCCAAAACAATCAATTCCAATTTTACAGCCAGAGGAAAGGTGTTTAAATGTTGATAGCATTTCTGGAAAAGAGAACGTTGCCCCCTCCCTCCCGCCAAAGAAAAGGAAAAGGGAGTGA	3423	0.3947	MGFESGAQVCSCTDHTHTRGKECEYDVFLSFRGEDTRYGFTGYLYDALTRKGINAFIDGESLRRGDEISPALTKAIEWSRICVIVFSQNYASSTWCLDELVKIIDCMTLRGQCILPVFYQVDPSTVRHQRDSYARAMAQHEIKFRDYMDRVTRWRSALSQAANFSGWQVKHEYEFQFVERIVEEVSSRLNRPILHVTTYPVGFESRISQIIPLLGLESNNDVRMVGIYGMGGIGKSTIARAVYNLIAPQFDGACFLSEVRETSFERGGLVDLQEKLLCDILGGKNKMELGNVYEGIPAIRHRLSNKKVLLILDDVNKVRQLEALAGMPDWFGYGSRILITTRDKHLLTAHNVTSIYEVELLNRVEALELFSWHAFRKREPDSIYVRISERVVHYAEHLPLALVVIGGAFIGRSLEEWEDALGKYRSVPEGDIIDKLKISYDDLDHFEQKIFLDIACFFQREDLKYVHTILKACGFGPTIGITKLIQRSLLTVEHGAIWMHSMIEEMAKEIVRRESPSNVGKRSRLWCPEDVIQVLTENIGTNAVEGIMLELPDVPEMEEIEWNGEAFVKMKNLRILIIRNACFSTAPTYLPNNLKMLHWENYPSSSFLPPSFHPKKLAILKVPHSHLTLMETPFEKFDALTRMNFSYCDFIKKLPDLSGVPNLQVLDLQSCRNLVEVDNSIGSLGKLERLNFTWCIELTALPQILKLKNLKEFDLEGCSKLRQFPEILEPMEYLSEIGLSGTAIEELPSSIKYLTTLHTLEVENCRRLEFVPHTIAQMQSLDCLIFEESPLIGNAFSRWDESIESCSTSSSSSSPSLSFKLSYFNICNNISHLFLHDCNLLDEHLPLIPKFFPQLEILSLIKNQFEAIPACFREFQRLEILTLDDCRKLQEFPDILSDMPKLKRISTMNCMALSPQSAELLLKIMAKRLLWPLSVVWDYDRTLIAVPRGRFPELLFAHRSKEETISFYARGDFLPRFLLCIYFDMNGNGGGGDVSLWCTMFACINKYEASMIYEYFICEDDNQLWLFDPREYGRFCRRGFAEHIRKMWDCDGWNHVEVGFIFGDVFGHSMPGPLVKEYGIQFKEEEINMDNIRFSLPSDLEEPKQSIPILQPEERCLNVDSISGKENVAPSLPPKKRKRE*	1141

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte9g00136	1140	PRINTS	Disease resistance protein signature	224	239	-	-
	Pte9g00136	1140	PRINTS	Disease resistance protein signature	302	316	-	-
	Pte9g00136	1140	PRINTS	Disease resistance protein signature	395	409	-	-
	Pte9g00136	1140	PRINTS	Disease resistance protein signature	658	674	-	-
	Pte9g00136	1140	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN	25	802	IPR044974	GO:0006952
	Pte9g00136	1140	ProSiteProfiles	TIR domain profile.	23	189	IPR000157	GO:0007165
	Pte9g00136	1140	SMART	till_3	24	164	IPR000157	GO:0007165
	Pte9g00136	1140	SUPERFAMILY	Toll/Interleukin receptor TIR domain	20	167	IPR035897	-
	Pte9g00136	1140	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	188	454	IPR027417	-
	Pte9g00136	1140	Gene3D	Ribonuclease Inhibitor	732	933	IPR032675	-
	Pte9g00136	1140	Gene3D	-	360	444	IPR042197	-
	Pte9g00136	1140	Gene3D	Ribonuclease Inhibitor	556	731	IPR032675	-
	Pte9g00136	1140	Gene3D	-	22	189	IPR035897	-
	Pte9g00136	1140	FunFam	Disease resistance protein (TIR-NBS-LRR class)	21	191	-	-
	Pte9g00136	1140	MobiDBLite	consensus disorder prediction	1121	1140	-	-
	Pte9g00136	1140	Pfam	NB-ARC domain	210	424	IPR002182	GO:0043531
	Pte9g00136	1140	Gene3D	-	190	355	IPR027417	-
	Pte9g00136	1140	SUPERFAMILY	L domain-like	499	923	-	-
	Pte9g00136	1140	Pfam	TIR domain	25	190	IPR000157	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte9g00136	Pte-Chr9	1468398	1472585	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte9g00136	24	784	WRKY Transcription Factor Family	AT4G12020	30.280	1.08e-93	328

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte9g00136	-		-	ccaj:109810288	875.544