Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00118 ATGGATATTGAGGAGGACATCCGTTCACTGCAGCTTGACACTGCAGAAGATAATGACGGAGTGGTAAAGCAAGAAGATGCAAAGCCAGAAGTTGAGGGTCCCAATAAGATGGTTGAAGATTCAAAGGCGGAGGAGGTCAATGTTTTGCCTAAAGTTGTCGCTGAGGAAGTTGCTGCTCCAGAGGAGGATGAGCCTGATCAATCAGAGCGGAATAGGAAGCGGCACTTGAATGTTGTGTTTATTGGTCACGTTGATGCGGGTAAGTCCACTATTGGAGGCCAGATACTTTTCTTAAGTGGACAAGTTGATGAGCGGACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGCAGGGAAAGCTGGTATATGGCATATATCATGGATACCAATGAAGAAGAGAGAGTCAAGGGTATCACAGTTGAAGTTGGAAGGGCACATTTTGAAACAGAAACAACAAGGTTCACTATTCTGGACGCACCTGGTCATAAAAGTTATGTTCCCAACATGATCAGTGGTGCATCACAAGCTGATATCGGTGTACTGGTAATTTCTGCTCGTAAGGGCGAATTTGAAACTGGATTTGAGAAAGGTGGGCAGACCCGTGAACATGTTCAACTTGCAAAAACCTTGGGGGTGACTAAGTTGCTTCTTGTTGTTAACAAAATGGATGAGCCGACTGTGAAATGGTCTAAAGAAAGGTATGATGAAATTGAGTCAAAGATGGTCCCTTTCCTGAAATCTTCAGGATACAATGTGAAGAAAGATGTTCAGTTCTTACCTATTTCTGGTCTTATTGGTGCAAACTTGAAGTCTAGAATGGATAAAAGCATTTGCCCATGGTGGAATGGGCCATGTCTTTTTGAAGCACTTGATGCTGCTGAAGTTCCTCCTCGGGATCCCAATGGTTCTTTCAGGATGCCTATAATAGACAAGTTCAAAGACATGGGAACTGTTGTTATGGGCAAATCAGAATCTGGGAGTATTCGTGAGGGAGATTCATTGTTGATGATGCCCAATAAGGTTAATGTTAAAGTCGTTGCCATATATATTGATGAAGATAGGGTTAAACATGCTGGGCCAGGTGAAAACCTACGAGTCAGATTATCTGGCATCGATGAATCTGATATATTATCGGGTTTTGTTTTGTCCAGTGCAGCTAAACATATACAAGCTGTTACTGATTTTGTTGCTCACTTGCGGATCCTTGAGTTGCTAGACAATGCAATATTTACTGCTGGGTATAAAGCTGTTTTGCACATCCACTCTGTTGTTGAGGAATGTGAGATTGTGGAGTTACTACAACAAATTGACCCCAAGACTATGAAGCCTACAAAAAAGAAAGTTCTTTTTGTGAAGAATGGGGCTCTTGTTGTGTGCCGAATACAGGTTCATAACTCAATTTGTGTTGAGAAGTTCTCAGATTTCCCACAACTCGGAAGGTTCACTCTTCGTTCTGAAGGAAAAACGATTGCAGTTGGAAAAATCACTGATCTTTGA 1500 0.4173 MDIEEDIRSLQLDTAEDNDGVVKQEDAKPEVEGPNKMVEDSKAEEVNVLPKVVAEEVAAPEEDEPDQSERNRKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGITVEVGRAHFETETTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGFEKGGQTREHVQLAKTLGVTKLLLVVNKMDEPTVKWSKERYDEIESKMVPFLKSSGYNVKKDVQFLPISGLIGANLKSRMDKSICPWWNGPCLFEALDAAEVPPRDPNGSFRMPIIDKFKDMGTVVMGKSESGSIREGDSLLMMPNKVNVKVVAIYIDEDRVKHAGPGENLRVRLSGIDESDILSGFVLSSAAKHIQAVTDFVAHLRILELLDNAIFTAGYKAVLHIHSVVEECEIVELLQQIDPKTMKPTKKKVLFVKNGALVVCRIQVHNSICVEKFSDFPQLGRFTLRSEGKTIAVGKITDL* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00118 499 SUPERFAMILY Translation proteins 296 387 IPR009000 -
Pte9g00118 499 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 73 299 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 CDD eRF3_II 305 385 - -
Pte9g00118 499 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 129 144 IPR031157 -
Pte9g00118 499 Gene3D Translation factors 302 387 - -
Pte9g00118 499 Pfam Elongation factor Tu GTP binding domain 73 278 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 394 498 IPR009001 -
Pte9g00118 499 PANTHER TRANSLATION FACTOR 67 498 - -
Pte9g00118 499 PRINTS GTP-binding elongation factor signature 172 183 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 PRINTS GTP-binding elongation factor signature 136 144 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 PRINTS GTP-binding elongation factor signature 156 166 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 PRINTS GTP-binding elongation factor signature 77 90 IPR000795 GO:0003924|GO:0005525
Pte9g00118 499 MobiDBLite consensus disorder prediction 1 44 - -
Pte9g00118 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 301 387 - -
Pte9g00118 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 54 297 - -
Pte9g00118 499 FunFam Putative translation elongation/initiation factor family protein 391 499 - -
Pte9g00118 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 68 308 IPR027417 -
Pte9g00118 499 Gene3D - 55 296 IPR027417 -
Pte9g00118 499 Gene3D Translation factors 391 499 - -
Pte9g00118 499 CDD eRF3_C_III 391 499 - -
Pte9g00118 499 CDD EF1_alpha 77 298 - -
Pte9g00118 499 Pfam Elongation factor Tu C-terminal domain 390 498 IPR004160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00118 Pte-Chr9 1342820 1352040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00118 73 496 Eukaryotic Initiation Factors Gene Family AT5G60390 37.002 4.72e-93 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00118 K03267 - gmx:100784412 801.201