Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00107 ATGAATGAGGTTGAGATTCTAACTCGACTGCGCCACCAAAATCTTGTATCTCTGTATGGCTGCACATCACGCCATTGCCGTGAGCTTCTCCTCGTTTATGAATTTATTTCGAATGGAACTGTTGCTGATCACCTTCATGGCCAGAAGGCCAACCCTGGCATGTTACCTTGGCAAATTAGAATGAACATTGCCTTAGAAACTGCTAGTGCATTGTCATATCTCCATGCTTCTGATATCATTCACCGTGATGTGAAAACTAACAACATTCTTCTTGATAAGAACTTCAGGGTGAAAGTTGCAGATTTCGGACTTTCACGTCTGTTCCCAACCGACAGAACACACATTTCAACAGCTCCACAAGGTACCCCTGGTTATGTTGATCCAGAATACCATGAATGCTATCAGCTTACAGACAAGAGTGATGTCTATAGCTTTGGAGTAGTGTTGATTGAGCTAATATCATCTAAGCCTGCTGTGGACATAACAAGGCATCGGCATGAGATCAATTTGTCAACTATGGCCATTAACAAGATTCAACATGGGGCCTTGTGTGAACTTGTGGACCCATTCCTTGGATTTGAGTCAAACTACAAGGTGAGGAAGATGATAAATACTGTTGCAGAAGTAGCATTTCAGTGCTTGCAGGGCGTGAAAGATATGAGGCCATCCATGCTTGAAGTGTTGGAATCATTGAATGATATACAGAATGATTTCCATGCTAAAGGTGAGGCGGAAGAAATGGACATAAGAGGAGATGATGCTGTCTTGCTCAAGAGTGAACCCCCTCCATTTTCACCGGAGTCCATGGCTTCAAATCTAAGAAGCACATCCACAACACCAAATACAAGTGGATAA 855 0.4281 MNEVEILTRLRHQNLVSLYGCTSRHCRELLLVYEFISNGTVADHLHGQKANPGMLPWQIRMNIALETASALSYLHASDIIHRDVKTNNILLDKNFRVKVADFGLSRLFPTDRTHISTAPQGTPGYVDPEYHECYQLTDKSDVYSFGVVLIELISSKPAVDITRHRHEINLSTMAINKIQHGALCELVDPFLGFESNYKVRKMINTVAEVAFQCLQGVKDMRPSMLEVLESLNDIQNDFHAKGEAEEMDIRGDDAVLLKSEPPPFSPESMASNLRSTSTTPNTSG* 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00107 284 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 1 276 IPR044652 GO:0004672
Pte9g00107 284 ProSiteProfiles Protein kinase domain profile. 1 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00107 284 Gene3D Phosphorylase Kinase; domain 1 1 36 - -
Pte9g00107 284 SUPERFAMILY Protein kinase-like (PK-like) 1 231 IPR011009 -
Pte9g00107 284 Pfam Protein kinase domain 2 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00107 284 MobiDBLite consensus disorder prediction 265 284 - -
Pte9g00107 284 FunFam Wall-associated receptor kinase-like 20 36 244 - -
Pte9g00107 284 SMART serkin_6 1 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00107 284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 79 91 IPR008271 GO:0004672|GO:0006468
Pte9g00107 284 MobiDBLite consensus disorder prediction 250 284 - -
Pte9g00107 284 Gene3D Transferase(Phosphotransferase) domain 1 37 247 - -
Pte9g00107 284 PIRSF ILK 1 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00107 Pte-Chr9 1232044 1232898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00107 1 284 Receptor kinase-like Gene Family AT1G25390 63.973 2.34e-124 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pte9g00107 Pkinase 4.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00107 - - qsa:O6P43_008550 460.685