Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00098 | ATGCAGGTACTCAAACAAAAAAATCGAACTCAATTCAATGAAAGAAGACTAGAAAGGAAAGTAAGGATTATATATGATGACCCAGATGCCACAGATAGTTCAAGTGATGAAGAAGACAACCAATGCAGTGGTCCCCGGCGGAATGAAATGGCTACTAGTATTAGTAAGCGTGTGGTAATCGAAATTGCCATACCATTTAAGCAAATTGGAACGAATGCTGAGGTGAGTAACAGCGAGAATAACCAAAATCTGATTCCAAGCACAACGTATAAAGGTGTTCGGCGTAGAAAATGGGGAACGTATGCTGCAGAAATTCGAAATCCCTTTACAAAGAAACGTGAGTGGCTCGGTACTTTCAGTGAACCACAGCAAGCTGCTGATGCATATCAAAGAAGGAAGGAAGATTTCGAGAGATTGGTGGCATTGAAGGAACAGGAAAGTTTGCCAATGGATGATGTTTCTGCATTAGAAGGGAACGACGATTCTGATTTTCTTCACCCATCTCCATCATCTGTGCTTGATATCAGTACTGTGACAACTACAGCTCAGCAATGTAATAATAACATGCAAAGTACAGCTGATGAAAGCAATTGGAAACTTATTGACATGGAAGCAAAGTTTGAAGAAGAGCAATCAATTGCAGGATTGTTGGAAGAGCCAATAATGCCTGCATTAGAGCTTCAACCACTGAACCCAGAAACATTTTGCACTGAGAATTCTGAGCTACATGAAAACAATTTAGGCTACTTCAATCATACGAGTTTCATGTATCAATTTCATCAAATTTCTTGGGCTTTTGGGGTGCCTAAAATGGGTGAGCATAGAAGCTTTAGCCACATGGATACTGATTCTGATTATGGAATCCTCACATGGGTTGATGAACTTGTTGAAACCCCTTGA | 900 | 0.4022 | MQVLKQKNRTQFNERRLERKVRIIYDDPDATDSSSDEEDNQCSGPRRNEMATSISKRVVIEIAIPFKQIGTNAEVSNSENNQNLIPSTTYKGVRRRKWGTYAAEIRNPFTKKREWLGTFSEPQQAADAYQRRKEDFERLVALKEQESLPMDDVSALEGNDDSDFLHPSPSSVLDISTVTTTAQQCNNNMQSTADESNWKLIDMEAKFEEEQSIAGLLEEPIMPALELQPLNPETFCTENSELHENNLGYFNHTSFMYQFHQISWAFGVPKMGEHRSFSHMDTDSDYGILTWVDELVETP* | 300 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00098 | 299 | Pfam | AP2 domain | 90 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | SUPERFAMILY | DNA-binding domain | 89 | 133 | IPR016177 | GO:0003677 | |
Pte9g00098 | 299 | Gene3D | AP2/ERF domain | 89 | 138 | IPR036955 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | PRINTS | Ethylene responsive element binding protein signature | 90 | 101 | IPR001471 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | PRINTS | Ethylene responsive element binding protein signature | 112 | 128 | IPR001471 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | Coils | Coil | 126 | 146 | - | - | |
Pte9g00098 | 299 | CDD | AP2 | 90 | 131 | IPR001471 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | ProSiteProfiles | AP2/ERF domain profile. | 89 | 149 | IPR001471 | GO:0003700|GO:0006355 | |
Pte9g00098 | 299 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 17 | 136 | - | - | |
Pte9g00098 | 299 | MobiDBLite | consensus disorder prediction | 23 | 50 | - | - | |
Pte9g00098 | 299 | SMART | rav1_2 | 89 | 155 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00098 | Pte-Chr9 | 1181055 | 1181954 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00098 | 45 | 222 | AP2-EREBP Transcription Factor Family | AT1G49120 | 36.464 | 8.55e-23 | 94.7 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pte9g00098 | AP2 | 4.4e-07 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00098 | - | - | gmx:102661579 | 140.969 |