Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00098 ATGCAGGTACTCAAACAAAAAAATCGAACTCAATTCAATGAAAGAAGACTAGAAAGGAAAGTAAGGATTATATATGATGACCCAGATGCCACAGATAGTTCAAGTGATGAAGAAGACAACCAATGCAGTGGTCCCCGGCGGAATGAAATGGCTACTAGTATTAGTAAGCGTGTGGTAATCGAAATTGCCATACCATTTAAGCAAATTGGAACGAATGCTGAGGTGAGTAACAGCGAGAATAACCAAAATCTGATTCCAAGCACAACGTATAAAGGTGTTCGGCGTAGAAAATGGGGAACGTATGCTGCAGAAATTCGAAATCCCTTTACAAAGAAACGTGAGTGGCTCGGTACTTTCAGTGAACCACAGCAAGCTGCTGATGCATATCAAAGAAGGAAGGAAGATTTCGAGAGATTGGTGGCATTGAAGGAACAGGAAAGTTTGCCAATGGATGATGTTTCTGCATTAGAAGGGAACGACGATTCTGATTTTCTTCACCCATCTCCATCATCTGTGCTTGATATCAGTACTGTGACAACTACAGCTCAGCAATGTAATAATAACATGCAAAGTACAGCTGATGAAAGCAATTGGAAACTTATTGACATGGAAGCAAAGTTTGAAGAAGAGCAATCAATTGCAGGATTGTTGGAAGAGCCAATAATGCCTGCATTAGAGCTTCAACCACTGAACCCAGAAACATTTTGCACTGAGAATTCTGAGCTACATGAAAACAATTTAGGCTACTTCAATCATACGAGTTTCATGTATCAATTTCATCAAATTTCTTGGGCTTTTGGGGTGCCTAAAATGGGTGAGCATAGAAGCTTTAGCCACATGGATACTGATTCTGATTATGGAATCCTCACATGGGTTGATGAACTTGTTGAAACCCCTTGA 900 0.4022 MQVLKQKNRTQFNERRLERKVRIIYDDPDATDSSSDEEDNQCSGPRRNEMATSISKRVVIEIAIPFKQIGTNAEVSNSENNQNLIPSTTYKGVRRRKWGTYAAEIRNPFTKKREWLGTFSEPQQAADAYQRRKEDFERLVALKEQESLPMDDVSALEGNDDSDFLHPSPSSVLDISTVTTTAQQCNNNMQSTADESNWKLIDMEAKFEEEQSIAGLLEEPIMPALELQPLNPETFCTENSELHENNLGYFNHTSFMYQFHQISWAFGVPKMGEHRSFSHMDTDSDYGILTWVDELVETP* 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00098 299 Pfam AP2 domain 90 131 IPR001471 GO:0003700|GO:0006355
Pte9g00098 299 SUPERFAMILY DNA-binding domain 89 133 IPR016177 GO:0003677
Pte9g00098 299 Gene3D AP2/ERF domain 89 138 IPR036955 GO:0003700|GO:0006355
Pte9g00098 299 PRINTS Ethylene responsive element binding protein signature 90 101 IPR001471 GO:0003700|GO:0006355
Pte9g00098 299 PRINTS Ethylene responsive element binding protein signature 112 128 IPR001471 GO:0003700|GO:0006355
Pte9g00098 299 Coils Coil 126 146 - -
Pte9g00098 299 CDD AP2 90 131 IPR001471 GO:0003700|GO:0006355
Pte9g00098 299 ProSiteProfiles AP2/ERF domain profile. 89 149 IPR001471 GO:0003700|GO:0006355
Pte9g00098 299 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 17 136 - -
Pte9g00098 299 MobiDBLite consensus disorder prediction 23 50 - -
Pte9g00098 299 SMART rav1_2 89 155 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00098 Pte-Chr9 1181055 1181954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00098 45 222 AP2-EREBP Transcription Factor Family AT1G49120 36.464 8.55e-23 94.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00098 AP2 4.4e-07 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00098 - - gmx:102661579 140.969