Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00093 ATGGCTCATTTCACAGCAGATTTACAAAGCTTGAGACCTTCATTTACTTTCTCAGATGTTGATCCCAGTATGGAACTGTTAAACCAGTTCACCTGTACTCTCAATCCACATATCCTAGGTAATAGCCCACATCTGAATATGCAGGGATTCATGCCCTTCTGCAGTGACAGTTTCTCTAGCCACAGACAACCTGATTTTCCAGGAAACTTTGTGAACAATTTTCCATGTCCTCCCCTTCATGGAAATCAAAATGCAGTTCCCCTTTCACACCCCATTGCGATACCTGATGATGTGAATGAACTTCATAACAGCAGAAAAAGAAGAAAACCAATGGATACGCCTGAAACCAGCTGCTCTGGAAACTCTACACCTCCGATTTCTGAAGCTGAAATCAAGATGAAAAATAGTTCAGGAAAAGCTAAGAAAGGGAAAAGTAATAAGATGGAAGAAGAGAAACCAAAAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCTACTGATAGCCACAGTTTAGCAGAAAGGGTGAGAAGAGGCAAGATAAATGAAAAGCTCAAGTGCTTGAGGAACATAGTTCCAGGATGCTACAAGACAATGGGTATGGCTGTAATGTTGGATGAGATCATAAACTATGTCCAGTCCTTACAAAATCAGGTCGAGTTCCTCTCTATGAAGCTCACAGCAGCAAGCACCTTTTATGATTTCAACTCTGAGACAGATGACTTAGAAACATTGCAGAGAGCAAAAGCCAACGAGACCAGAGAGTTAGAGAGATTACTGAGAGAAGGATATGGCGGAGGTTGTAGCTTCCAAACAAATTGGTCTCTTTGA 831 0.4164 MAHFTADLQSLRPSFTFSDVDPSMELLNQFTCTLNPHILGNSPHLNMQGFMPFCSDSFSSHRQPDFPGNFVNNFPCPPLHGNQNAVPLSHPIAIPDDVNELHNSRKRRKPMDTPETSCSGNSTPPISEAEIKMKNSSGKAKKGKSNKMEEEKPKEVVHVRARRGQATDSHSLAERVRRGKINEKLKCLRNIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLTAASTFYDFNSETDDLETLQRAKANETRELERLLREGYGGGCSFQTNWSL* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00093 276 Gene3D - 162 233 IPR036638 GO:0046983
Pte9g00093 276 Coils Coil 235 262 - -
Pte9g00093 276 FunFam transcription factor BEE 3-like 162 233 - -
Pte9g00093 276 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 165 215 IPR011598 GO:0046983
Pte9g00093 276 MobiDBLite consensus disorder prediction 134 171 - -
Pte9g00093 276 Pfam Helix-loop-helix DNA-binding domain 169 216 IPR011598 GO:0046983
Pte9g00093 276 SMART finulus 171 221 IPR011598 GO:0046983
Pte9g00093 276 MobiDBLite consensus disorder prediction 114 130 - -
Pte9g00093 276 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 104 239 IPR024097 GO:0006355
Pte9g00093 276 CDD bHLH_AtBPE_like 155 240 - -
Pte9g00093 276 MobiDBLite consensus disorder prediction 101 171 - -
Pte9g00093 276 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 233 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00093 Pte-Chr9 1143307 1144843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00093 1 277 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G73830 46.690 3.61e-60 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte9g00093 HLH 2.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00093 - - qsa:O6P43_005099 337.421