Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00092 ATGTCTAGTTCAAAGAATATAAGCAGTTCTAGTGAAGATGACATTGAGATTAGAAGAGGACCTTGGACACTTGATGAGGATGAGCTGCTCATCAAATACGTCGCTAATCATGGTGAAGGACGTTGGAATATGTTAGCAAAACATGCAGGACTCAAGAGAACAGGAAAGAGTTGTAGATTGAGATGGCTAAATTATCTGAAACCAGATGTAAAGCGTGGAAATTTAAGCCCCCAAGAACAGCTTATAATTTTTGAGCTACATTCGAAGTGGGGAAACAGGTGGTCAAAGATTGCTCAACGTTTACCTGGTAGAACTGACAATGAAATCAAGAACTATTGGAGAACACGGGTGCAGAAACAAGCTAAGCATTTAAAGATTGACAGTGATAGTATAGAATTTCAGAAATTTATCAAGTTGCTTTGGATCCCTCACTTGCTTCAGAAAGCTAAAGGATCATTTTCTTCGTCGCTGGTGTTGAACCAAAACCAAAACATGCCATTGCCTTCAAATCAGTACTCAGAATCAGCAACACCAACACAAATTCCTTTGCAGGGACATTGTAGCCCTTGCATGTATGAGACAGTTCTCAATACCGATCAACATGATCCACATTCGGACTTAAAGCACAACACCAGTTCATATATTTCTGCAGAATCAATTAGTACGGCCTCTCAAATGTCTGGATATCCCAACAGTCAACTTCAGAACATGTGTAACAGTGAAAGCAGCACCTTTCCACATAGTTTCTGCTATAAACACAATGATGTTTACGGCATGGACACATTCAACCTCGATATTACTACATCAGCAGCTGAAGGTTTTGAATTCCCAGTTGGAGATTGCCAAGTGACTGAAAGCAACTGGATCGACAAGGACTTTTCTGAATACCTTCAGAATATGGACGAGTTATGGCAAATATAG 921 0.3996 MSSSKNISSSSEDDIEIRRGPWTLDEDELLIKYVANHGEGRWNMLAKHAGLKRTGKSCRLRWLNYLKPDVKRGNLSPQEQLIIFELHSKWGNRWSKIAQRLPGRTDNEIKNYWRTRVQKQAKHLKIDSDSIEFQKFIKLLWIPHLLQKAKGSFSSSLVLNQNQNMPLPSNQYSESATPTQIPLQGHCSPCMYETVLNTDQHDPHSDLKHNTSSYISAESISTASQMSGYPNSQLQNMCNSESSTFPHSFCYKHNDVYGMDTFNLDITTSAAEGFEFPVGDCQVTESNWIDKDFSEYLQNMDELWQI* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00092 306 FunFam Myb transcription factor 19 71 - -
Pte9g00092 306 SMART sant 18 68 IPR001005 -
Pte9g00092 306 SMART sant 71 119 IPR001005 -
Pte9g00092 306 FunFam MYB transcription factor 75 117 - -
Pte9g00092 306 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Pte9g00092 306 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Pte9g00092 306 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Pte9g00092 306 Gene3D - 74 165 - -
Pte9g00092 306 Gene3D - 19 71 - -
Pte9g00092 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 70 IPR017930 -
Pte9g00092 306 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 16 210 IPR044676 GO:0003700|GO:0006355|GO:0043565
Pte9g00092 306 CDD SANT 76 115 IPR001005 -
Pte9g00092 306 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
Pte9g00092 306 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Pte9g00092 306 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 71 121 IPR017930 -
Pte9g00092 306 CDD SANT 21 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00092 Pte-Chr9 1137260 1139095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00092 14 156 MYB Transcription Factor Family AT1G68320 69.231 1.12e-71 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte9g00092 Myb_DNA-binding 2.9e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00092 K09422 - qsa:O6P43_008567 358.992