Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00084 ATGATTAACAGTAGTACGAATAAGAGTGTGGTCAGCAGCTCCGATCTCATTGATGCAAAGCTTGATGAGCATCAGTTATGTGGATCAAAGCAGTGCCCAGGTTGTGGTCACAGGTTTGAAGGCAAACTGCCGGATTGGATAGGTCTACCGGCAGGTGTAAAATTTGATCCAACAGACCAAGAATTAATAGAACATCTTGAAGCAAAAGTAGAGGCTAAAGACTCAAAGTCTCATCCCTTGATAGATGAGTTCATCCCTAGTATTGAAGGAGAAGATGGCATCTGTTACACCCATCCTGAAAAACTTCCAGGAGTTGCGAGAGATGGCTTGAGCAGACACTTCTTCCACAGACCTTCAAAGGCGTACACGACTGGCACAAGAAAAAGAAGGAAAATTCAAAACGAATGTGACTTGCAAAGTGGAGAAACACGATGGCACAAGACAGGTAAGACTAGACCTGTCATGGTGAATGGAAAACAAAAAGGTTGTAAGAAAATTCTTGTGCTCTACACCAACTTTGGAAAAAACAGAAAACCTGAGAAGACCAATTGGGTGATGCACCAATACCATTTGGGACAGCATGAGGAGGAGAAAGATGGAGAGCTTGTGGTATCAAAGATATTCTACCAGACTCAGCCTAGACAATGTAACTGGTCTGATAGAATTACAGCAGCAACAAATGTTATAAACAACGAATGCAGCAGTGACCCTAATAGCAGAGGAGAGAGTGGGAGTGGGAGTACTTCTTCTTCTTCAAAGGAAATAGTTCACCAAAGAGATGAGATGTCTATAGTTGGAGTCAATCCTTCATTGTCAAGCTATGCTGCTTTAGATATTCTACAGCTAAAATCTGAGCACTTTAGCTTTGCCACATACAGGAAAAGCTTCGACGAGATGGCGATAGGAGACGCGTCCACAAGGGAAGCATCAGCATCAGGTACGTGGGAAGCGGTACGTGATACGAATGGGCCACACAATGTGCCTCATGAACATCTGCATCAGCAACAGCAGCATCACCATATTGCAACTACAGCCTTTCATATCAGTAGACCGATGCATCCCATCTCAACCATCATTTCCCCTCCTCTTCCTCCCCAGGCCTCCATAATCTTTGATGATAACTCTTGCAATGCCTCAAGAGTTCTGCTTCAAAACGAAAACTATCAGCATCCACATCATAAATTGGGAGGAGGAAGGTCAGAATCTGGTTTGGAGGAACTAATCATGGGTTGCACTTCAAATGATGTCAAAGAGGAGAATTCCCTCGTAAATCCTCATGAAACTGAGTGGTTGAAGTACTCTTCGTATTGGCCTGACCCTGAAAACCCGGATCATCATGGATAG 1344 0.4375 MINSSTNKSVVSSSDLIDAKLDEHQLCGSKQCPGCGHRFEGKLPDWIGLPAGVKFDPTDQELIEHLEAKVEAKDSKSHPLIDEFIPSIEGEDGICYTHPEKLPGVARDGLSRHFFHRPSKAYTTGTRKRRKIQNECDLQSGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKDGELVVSKIFYQTQPRQCNWSDRITAATNVINNECSSDPNSRGESGSGSTSSSSKEIVHQRDEMSIVGVNPSLSSYAALDILQLKSEHFSFATYRKSFDEMAIGDASTREASASGTWEAVRDTNGPHNVPHEHLHQQQQHHHIATTAFHISRPMHPISTIISPPLPPQASIIFDDNSCNASRVLLQNENYQHPHHKLGGGRSESGLEELIMGCTSNDVKEENSLVNPHETEWLKYSSYWPDPENPDHHG* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00084 447 ProSiteProfiles NAC domain profile. 49 210 IPR003441 GO:0003677|GO:0006355
Pte9g00084 447 Pfam No apical meristem (NAM) protein 50 191 IPR003441 GO:0003677|GO:0006355
Pte9g00084 447 SUPERFAMILY NAC domain 43 210 IPR036093 GO:0003677|GO:0006355
Pte9g00084 447 MobiDBLite consensus disorder prediction 231 253 - -
Pte9g00084 447 Gene3D NAC domain 58 214 IPR036093 GO:0003677|GO:0006355
Pte9g00084 447 MobiDBLite consensus disorder prediction 231 257 - -
Pte9g00084 447 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 7 305 IPR044799 GO:0003700
Pte9g00084 447 FunFam NAC domain-containing protein 73 58 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00084 Pte-Chr9 844393 848755 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00084 12 444 NAC Transcription Factor Family AT5G56620 50.109 1.49e-130 381
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte9g00084 NAM 3.7e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00084 - - tcc:18588479 650.588