Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte9g00070 | ATGGGTCGCAGCATAGTTGAAGCAGTTTTAGAATTCACTAGAGGCATGGAGATGGCATTCGACCTTGACGAAGTTCTTGCTGTGGCTGAGGGATCATGTCGTAGAATGGCAGCAACCAAGTCCTATGTATCAAACTTGCCCACTGTTGTTTTTCCTGCGGATCATGATGTTTGCTCCGTTTGCATGGAGGGTTTCCAGCAGAAACTACAGTCAGTAGAAGAACAAGCAGGTGACAGCAATAAACGAGTTCCATGTGGTCATCTCTACCATGCCACCTGCATCACTACATGGCTTTCCCTCTTCAACACTTGCCCTCTCTGCCGGAGCAAATTCCAGCTAGACTTTGATTATGAATGA | 357 | 0.4678 | MGRSIVEAVLEFTRGMEMAFDLDEVLAVAEGSCRRMAATKSYVSNLPTVVFPADHDVCSVCMEGFQQKLQSVEEQAGDSNKRVPCGHLYHATCITTWLSLFNTCPLCRSKFQLDFDYE* | 119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte9g00070 | 118 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 27 | 113 | IPR013083 | - | |
Pte9g00070 | 118 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 37 | 109 | - | - | |
Pte9g00070 | 118 | ProSiteProfiles | Zinc finger RING-type profile. | 58 | 108 | IPR001841 | - | |
Pte9g00070 | 118 | SMART | ring_2 | 58 | 107 | IPR001841 | - | |
Pte9g00070 | 118 | Pfam | RING-H2 zinc finger domain | 56 | 108 | IPR024766 | GO:0008270 | |
Pte9g00070 | 118 | SUPERFAMILY | RING/U-box | 53 | 114 | - | - | |
Pte9g00070 | 118 | Coils | Coil | 62 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte9g00070 | Pte-Chr9 | 732197 | 732947 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte9g00070 | 17 | 118 | C3H Transcription Factor Family | AT5G01980 | 41.818 | 4.46e-14 | 65.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte9g00070 | K22378 | - | qsa:O6P43_003971 | 132.88 |