Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00061 ATGGCAGAGCCATTAAACTCAGAGAACGACACCAGTATAAACCGGTGTTCATCTGCATCCTCTTCTTACTGCTCGCACTCTGTCTCACCTCCTTCACCGTCATCCTCTTCTGGCTCTGGGTCCGGTTCTAAGAAAGCAGTAGCCGTGAAGCCTGATGAGTCAAGGAAAAAGGACCAGAAGAAACCTGCCAAGAGAGCAAGAGATAATAGTAGACACCCAGTTTACAGGGGAGTCCGAATGAGGACTTGGGGTAAGTGGGTGTCTGAAATCCGCGAGCCCAGGAAGAAGAATCGGATCTGGTTAGGAACCTATGCTACACCGGAAATGGCGGCTCGAGCACATGATGTTGCTGCAATGAGTATCAAAGGCACCTCCGCCATACTCAACTTTCCTGAGCTCGCGCCTTCTCTGCCTCGTCCAGCTTCCGACTCTCCTCGAGATGTTCAAGCTGCTGCTGCTAAAGCAGCTTCAATGGAGGTCTTCAATCAGAAAACAGAACCATTATCCTCATCTTCGACTTCTTCATCTTCGTCGTTAAAGCAATCTTATTCTTCTTCTTCGCTGGCTCTTTCTTGCTCCGGTGACCCGTCAACCCCAGAGGAGTTAGGCGAGATACTGGAGCTGCCGAGCTTAGGAACGAGTTTTGAGTCGAATGAGTCGCATAACGAGTTTGTATATGCCGACTCGATTGACGGGTGGCTCTGTCCTCTGCCATGGTATCACAGCATTCAATATGACGAGGACTGTTGTGTCATTAGTGATCGGACAGAGATTGGGATACCTTGTGGCTTTGAGGCGAATCTATGGCAACACTAA 816 0.4951 MAEPLNSENDTSINRCSSASSSYCSHSVSPPSPSSSSGSGSGSKKAVAVKPDESRKKDQKKPAKRARDNSRHPVYRGVRMRTWGKWVSEIREPRKKNRIWLGTYATPEMAARAHDVAAMSIKGTSAILNFPELAPSLPRPASDSPRDVQAAAAKAASMEVFNQKTEPLSSSSTSSSSSLKQSYSSSSLALSCSGDPSTPEELGEILELPSLGTSFESNESHNEFVYADSIDGWLCPLPWYHSIQYDEDCCVISDRTEIGIPCGFEANLWQH* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00061 271 SMART rav1_2 74 137 IPR001471 GO:0003700|GO:0006355
Pte9g00061 271 FunFam Ethylene-responsive transcription factor 2 73 132 - -
Pte9g00061 271 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 55 214 - -
Pte9g00061 271 PRINTS Ethylene responsive element binding protein signature 97 113 IPR001471 GO:0003700|GO:0006355
Pte9g00061 271 PRINTS Ethylene responsive element binding protein signature 75 86 IPR001471 GO:0003700|GO:0006355
Pte9g00061 271 MobiDBLite consensus disorder prediction 48 75 - -
Pte9g00061 271 SUPERFAMILY DNA-binding domain 74 132 IPR016177 GO:0003677
Pte9g00061 271 MobiDBLite consensus disorder prediction 1 43 - -
Pte9g00061 271 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Pte9g00061 271 Gene3D AP2/ERF domain 74 132 IPR036955 GO:0003700|GO:0006355
Pte9g00061 271 MobiDBLite consensus disorder prediction 1 76 - -
Pte9g00061 271 ProSiteProfiles AP2/ERF domain profile. 74 131 IPR001471 GO:0003700|GO:0006355
Pte9g00061 271 CDD AP2 75 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00061 Pte-Chr9 662184 663742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00061 52 242 AP2-EREBP Transcription Factor Family AT5G11590 61.026 2.58e-66 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte9g00061 AP2 7.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00061 K09286 - qsa:O6P43_003984 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00061 9 662184 663742 Pte9g00061 9 662184 663742 RCT