Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00058 ATGCCTAGCATGCCAGCTTCGATTCTCTTCCTCATCTCATTTTTACACTTTGGACGTTTCTCTCTTGGGGGTGCAGATAATTCAGAGGTAGAAGCCCTGTTGAAATTCAAGAACTCGTTGGAGAACAACAATGCGTTATCCTCTTGGAACAAATTAACTAACCCAGACCCATGCGATGGGAAAAAAGAGAATTGGCTTGGTGTTCTTTGCGCTAGCGACAGAGTTTGGGGGCTTAAACTTGAGAACTTGGGTCTCAAGGGTACCATAGATGTTGAAGCACTCAGCCAATTGGAATCCCTGAGAACCATTAGTTTCATGAACAACAGCTTTGAAGGCAAATTTCCAGATATGAGAAAACTCACTGGTATCAAATCAATTTACCTCTCAAATAATCGATTCTCGGGGGAGATTTCGCCCTCAACTTTCCAGGGGTTGATCTGGTTGAAGAAACTGTATTTAGAGAATAATCAATTCACCGGTGCTATTCCAATCTCACTTGTAACTTTGCCTAAACTCGTCGAGTTGACGCTTCAGAACAACCAATTTGAAGGCAAGCTCCCTGATTTTCAACAGAGGTTCCTCATATTTGATGTAACAAACAATAAGTTGGAGGGTCAAATTCCACCAGCCCTTACCAACTTGCCCGCCACTTCTTTCTCTGCAGGAAATGGAGGTCTATGCGGAACGCCATTAGGTTCATGTCAGAAAGGGCTTTCGCTAGTGAACAAAATTGTGCTTGGCGTGTCAATTGGGCTGGCAATGATTATTATTGCGTTTGTTATCTTCATCTTCATTCGACGGAAACAAACAAAAGAAGCTGAGGAGACTTCATCCATGACGTTGCCCAGGAAATCAAAAGCAAAGGAAGATGACTGTGCGAACAAATCCGGATTGGATACCGCATCGGTGAGCAGCAAGAGGGGCGAGATGAAGTTGACATTTTTGCGGGATGACAGGCAGAAGTTTGACTTACAAGAATTACTGAGAGCATCTGCTGAAATATTAGGCAGTGGCTACTTTAGTTCATCGTATAAGGCTGCTTTGATGAACGGAACCATGATTGTTGTCAAGAGGTTTAAGCAAATGAACAACCTGGGAAAGGAAGAGTTTCATGAGCATATGAGAAGGTTGGGCAGGTTGAGCGACCCCAACTTGCTTCCCATTGTGGCTTATTATTACAGAAGGGAAGAGAAGCTCATGGTTACTGACTATGTCGAAAATGGCAGCTTGGCTGCTCGTCTTCATGGGCACCAAGCTTTAGGCGAAGCAACTCTGGATTGGCCAACCAGGCTGAAAATCGTGAAAGGCGTAGCAAAGGGTCTGCAGTATCTGTATAATGAGTTGCCAAGCCTTGTCGCACCTCATGGACATCTTAAATCCTCCAATGTTCTGCTGAACGAGTCTTTCGAGCCACTGCTTGCAGACTACGGCTTAATCCCTGTGATGAACCAGGAGCAAGCCCGACAACTGATGGTGGCCTACAAGTCTCCTGAGTTCTTGCAAAATGGCCGGATTACTAAGAAGACTGATATATGGAGCTTCGGGATACTGCTGTTGGAGATCTTAACAGGTCAGTTGCCAGCCAGCTTTCTACAACAAGGTAAAGCCAATGAACAAGATATAGCAAGTTGGATCAGTTCAGTGGTTCCGGAGAACTGGACAAATGATGTATTTGACAAAGAGATGGGTGGCACCAGTGGGTGTGAAGGGGAGATGGGAAAGCTGATACAGATTGCTTTAAGTTGCTGCGAGGCAGATGCAGATAAAAGATTGGATTTGAAGGAGGTTGTTGCAAGAATAGAGCAAGTGAAAGAGAGGGATGGTGATCATGCATGA 1836 0.4472 MPSMPASILFLISFLHFGRFSLGGADNSEVEALLKFKNSLENNNALSSWNKLTNPDPCDGKKENWLGVLCASDRVWGLKLENLGLKGTIDVEALSQLESLRTISFMNNSFEGKFPDMRKLTGIKSIYLSNNRFSGEISPSTFQGLIWLKKLYLENNQFTGAIPISLVTLPKLVELTLQNNQFEGKLPDFQQRFLIFDVTNNKLEGQIPPALTNLPATSFSAGNGGLCGTPLGSCQKGLSLVNKIVLGVSIGLAMIIIAFVIFIFIRRKQTKEAEETSSMTLPRKSKAKEDDCANKSGLDTASVSSKRGEMKLTFLRDDRQKFDLQELLRASAEILGSGYFSSSYKAALMNGTMIVVKRFKQMNNLGKEEFHEHMRRLGRLSDPNLLPIVAYYYRREEKLMVTDYVENGSLAARLHGHQALGEATLDWPTRLKIVKGVAKGLQYLYNELPSLVAPHGHLKSSNVLLNESFEPLLADYGLIPVMNQEQARQLMVAYKSPEFLQNGRITKKTDIWSFGILLLEILTGQLPASFLQQGKANEQDIASWISSVVPENWTNDVFDKEMGGTSGCEGEMGKLIQIALSCCEADADKRLDLKEVVARIEQVKERDGDHA* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00058 611 MobiDBLite consensus disorder prediction 274 295 - -
Pte9g00058 611 MobiDBLite consensus disorder prediction 274 300 - -
Pte9g00058 611 Gene3D Transferase(Phosphotransferase) domain 1 405 610 - -
Pte9g00058 611 SUPERFAMILY Protein kinase-like (PK-like) 333 602 IPR011009 -
Pte9g00058 611 Gene3D Ribonuclease Inhibitor 26 244 IPR032675 -
Pte9g00058 611 Pfam Protein tyrosine and serine/threonine kinase 333 599 IPR001245 GO:0004672|GO:0006468
Pte9g00058 611 Pfam Leucine rich repeat 123 182 IPR001611 GO:0005515
Pte9g00058 611 Gene3D Phosphorylase Kinase; domain 1 295 404 - -
Pte9g00058 611 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 606 IPR046959 -
Pte9g00058 611 FunFam Nuclear pore complex protein NUP107 26 188 - -
Pte9g00058 611 SUPERFAMILY L domain-like 26 234 - -
Pte9g00058 611 ProSiteProfiles Protein kinase domain profile. 329 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00058 611 FunFam Pollen receptor-like kinase 1 405 611 - -
Pte9g00058 611 Pfam Leucine rich repeat N-terminal domain 27 70 IPR013210 -
Pte9g00058 611 FunFam pollen receptor-like kinase 1 299 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00058 Pte-Chr9 643672 646024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00058 1 609 Receptor kinase-like Gene Family AT5G35390 51.468 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pte9g00058 PK_Tyr_Ser-Thr 8.2e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00058 - - qsa:O6P43_003880 751.125