Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00050 ATGGAGATGGACAATCCATTACCGAAGAGCTGGAGCATACATACCCGACCCGAAATCATTGCCAAATACCAAATCATGGAGCGGGTTGGCTCTGGTGCCTACTCTGATGTCTACAAAGCTCGTCGGCTATCTGACAACCTCATAGTTGCTCTTAAAGAAGTCCATGATTACCAATCTGCCTTCAGAGAAATTGAGGCTCTTCAGATTCTCCAGAACTCGCCAAATGTCGTCGTCTTGCATGAGTACTTCTGGCGCGAGGATGAAGACGCTGTACTGGTACTGGAGTTTCTCAGGACTGACTTGGCAACTGTGATCAGAGATGCTAAAAAGGCTAGAAAAGATGGTGATGGTGGGTGTCTAAGTGTTGGTGAGATCAAGCGGTGGATAATTCAGATTCTTTCTGGGGTTGATGCTTGTCATAGGAATATGATTGTGCATAGAGACTTGAAGCCCAGTAATTTGCTAATTTCTGATGATGGGGTGCTCAAGTTAGCTGATTTCGGCCAGGCAAGAATACTTATGGATATTGGATCCATGGCAGAGAATGAGAACCCGCAGCTGTACCAGGGCGATCCTCCCAACGGAGAAAACTACCTCCCACCACCTGAGGCTCCTATTCCAACTTATGACCCCCATTTACAGGACTATGGTACTCAAGACCAGGGAGCTGTGACTAAAGAAGAATGCTTTAAAGTTTTGGATGAGCTCAAGACTAGAAGTTCCACAGATGGTACAGATAAAGAAATAAACTTCAATGATGGAGATGCATCTTGTCTCGCAACATGCACAACCAGTGACATAGAAGATGATCCTTTTAAAGGCTCGTTTACTTATGAGGCAGAAGCTGGAGACTCTGCAAATGCTGCTCTAACATCATGTGTGGGAACACGTTGGTTTAGAGCCCCTGAATTACTTTATGGTTCCACCCAATATGGTTTAGAGATTGATATCTGGTCCTTGGGCTGTATTTTTGCTGAGCTTTTCACACTAGAGCCCCTATTTCCGGGGACTTCTGATATTGATCAGCTGGGAAGAATTATGGATGTCTTGGGCAACCTCAATGAGGAAGTATGGCCTGGCTGCTCAAGACTCCCTGATTATAAGATGATCTCATTTGGAAAAGTGGAAAATCCAGTTTGTATAGAAGCACGAATGCCGTGTTGCACCTCAGATGAAATCACTTTGATAAAGAAACTGGTTTGTTATGATCCAGCTAAAAGAGCTACAGCAATGGAGTTGCTTCAGGACAAGTATTTTAGGGAAGTACCTCTGCCTGTCGCCGTAGTGGAGCTGCGAGTTCCCTCGACCAGAAGTGGCCAAGATGTCGATGATCCTGCTGAATGGTATGATTACAATGGGATGGGTTCAGATTCCGATGATGACGACTTTGGCCCTATGAAATTCTCATCCACGAGTACTGGTTTCTCCATACAGTTCCACTGA 1443 0.4511 MEMDNPLPKSWSIHTRPEIIAKYQIMERVGSGAYSDVYKARRLSDNLIVALKEVHDYQSAFREIEALQILQNSPNVVVLHEYFWREDEDAVLVLEFLRTDLATVIRDAKKARKDGDGGCLSVGEIKRWIIQILSGVDACHRNMIVHRDLKPSNLLISDDGVLKLADFGQARILMDIGSMAENENPQLYQGDPPNGENYLPPPEAPIPTYDPHLQDYGTQDQGAVTKEECFKVLDELKTRSSTDGTDKEINFNDGDASCLATCTTSDIEDDPFKGSFTYEAEAGDSANAALTSCVGTRWFRAPELLYGSTQYGLEIDIWSLGCIFAELFTLEPLFPGTSDIDQLGRIMDVLGNLNEEVWPGCSRLPDYKMISFGKVENPVCIEARMPCCTSDEITLIKKLVCYDPAKRATAMELLQDKYFREVPLPVAVVELRVPSTRSGQDVDDPAEWYDYNGMGSDSDDDDFGPMKFSSTSTGFSIQFH* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00050 480 ProSiteProfiles Protein kinase domain profile. 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00050 480 FunFam Cyclin-dependent kinase F-1 14 108 - -
Pte9g00050 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Pte9g00050 480 PANTHER CELL DIVISION PROTEIN KINASE 22 425 - -
Pte9g00050 480 Gene3D Transferase(Phosphotransferase) domain 1 259 430 - -
Pte9g00050 480 Gene3D Transferase(Phosphotransferase) domain 1 113 216 - -
Pte9g00050 480 Gene3D Phosphorylase Kinase; domain 1 14 112 - -
Pte9g00050 480 SUPERFAMILY Protein kinase-like (PK-like) 10 435 IPR011009 -
Pte9g00050 480 Pfam Protein kinase domain 23 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00050 480 Pfam Protein kinase domain 289 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00050 480 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Pte9g00050 480 SMART serkin_6 23 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00050 480 MobiDBLite consensus disorder prediction 183 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00050 Pte-Chr9 600472 604126 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00050 3 479 Core Cell Cycle Gene Families AT4G28980 64.509 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CCRK Pte9g00050 Pkinase 3.6e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00050 - - qsa:O6P43_004009 691.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte9g00050 9 600472 604126 Pte9g00050 9 600472 604126 RCT