Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00048 ATGGGAGAAGGTCAAGGTGGCGATTGTACTCCGAAGAATGTGCAATCGGAGACTGCTGTGATGGCGTTGGAGACATCGGCGCCGGTGTCGGCGGCTTTGGCTTCAGATGTTCCAGCTAAAAGACTGGCGAGACAGCTTGATTTCACCGGCTATGGTGGGGTAGCAGGGGGTGTAGCTTTACCAGAACATCAGCAGAAGCAATCACAGCCACAGATGCAGACACAGCCGCAATCTCAGGCGCAGCCACGACCTCAGCTTCAGCTACAGCCTCTGTCTCCTAAGACTGTGCAAATTCAGCAGCCAAGGCTACAACCATTTCCACAAGCTCAACTACCTACAGTAACTCAGCAACAGGTGGTGATGATGCCAATTGCAGCTCAAGTGCCACATCCTCCTGCAAGGGTTGGAAAACCAGAGTCTCCGAAGTCAAGATCAAGGCCTAACTTTGATTTAAAAGATGGAACTCCAAAAAAGCAAAAACAGTGCAATTGTAAACACTCAAAATGCTTAAAATTATATTGTGAATGTTTTGCATCTGGAATATATTGTGATGGATGCAATTGTTCCAATTGTTGTAACAACGTTGAAAATGAAGCTGCTAGACGAGAAGCTGTTGAAGCTACTTTGGAGCGCAATCCAAATGCATTTAGACCAAAAATTGCAAGTAGTCCTCATGCAACGCGGGAGAGCAGGGAGGATGCCGGAGAGATTTTACTGTTGGGAAAACACAACAAAGGATGCCACTGCAGGAAATCAGGATGTCTGAAAAAGTACTGTGAATGCTTCCAGGCCAACATTCTTTGCTCTGAGAATTGTAAATGCATAGACTGCAAGAATTATGAGGGAAGTGAAGAAAGACAGGCCTTATTCAATGGCGATCAAAATAATATGACATATATTCAACAGGCAGCAAATGCTGCCATAACTGGAGCTATAGGCTCATCTGGATATACCTCTCCTCCATCCAAGAGAAGAAAAGGTCAGGAGCTCCTCTTTGGGTCCATGACAAAGGATCCATCGGTGCACAGACTTGGACCCTTTCAACATGTAAACCATCCCAGACCCCCTACACTCTCTTCATCTATACCTTCAATGTCAGGGACTCAAGTTGGTCCACCTATGTTGGGTGCATCGAAATTTACATACAGATCTCTGTTAGCAGACATCATCCAGCCACAACACTTGAAGGAGATATGTTCATATTTGGTGGTGATGTCAGACCAAGCTGCAAAGGCACTTGCAGAGCAGAAAAATTTAACGGAAAAGCAGAGAGAAGATAAAGCAGAAGGTTCTACTGCTTCTTCAACACTAGAGCAAGTTCTAAACCAAAGAGAAGCTGAAAATCAGAAAACTGAAACCACGAATTATTTGAATTCAAACCAGGCTGACAAAATTAGTCCAGATAATTCCAGTTCAGATGGCACTGATGCTCAGAAGGCAAGGCCAGTGTCCCCTGTAACCTTAGCTTTGATGTGCGATGAACCAGAAACTATGTTCATGACAACAGCTTCACCTGATGGCATGATGACGCATACCACCGACATATCCTTGCAACCGCCTAATGGACAAGGCGTGACAGAGGTTTATGCAGACCAAGAAAGACTTGTGTTAACAACATTTCGAGATTTCCTTAATAGGATGATCACAATGGGAGAAATAAATGAAACGAAGTGTTCTGCTGTAGCAAGATGTGAACCAGATTCTCAAAAAGATGCTACCAACAACGCCCATAGGAGTAGTGGTTCTGACACCACATTGCAGCCACACCCAAGCAATGGTGTTGGAAAACCTGTTGTACTTCATCGGCAATGA 1812 0.447 MGEGQGGDCTPKNVQSETAVMALETSAPVSAALASDVPAKRLARQLDFTGYGGVAGGVALPEHQQKQSQPQMQTQPQSQAQPRPQLQLQPLSPKTVQIQQPRLQPFPQAQLPTVTQQQVVMMPIAAQVPHPPARVGKPESPKSRSRPNFDLKDGTPKKQKQCNCKHSKCLKLYCECFASGIYCDGCNCSNCCNNVENEAARREAVEATLERNPNAFRPKIASSPHATRESREDAGEILLLGKHNKGCHCRKSGCLKKYCECFQANILCSENCKCIDCKNYEGSEERQALFNGDQNNMTYIQQAANAAITGAIGSSGYTSPPSKRRKGQELLFGSMTKDPSVHRLGPFQHVNHPRPPTLSSSIPSMSGTQVGPPMLGASKFTYRSLLADIIQPQHLKEICSYLVVMSDQAAKALAEQKNLTEKQREDKAEGSTASSTLEQVLNQREAENQKTETTNYLNSNQADKISPDNSSSDGTDAQKARPVSPVTLALMCDEPETMFMTTASPDGMMTHTTDISLQPPNGQGVTEVYADQERLVLTTFRDFLNRMITMGEINETKCSAVARCEPDSQKDATNNAHRSSGSDTTLQPHPSNGVGKPVVLHRQ* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00048 603 MobiDBLite consensus disorder prediction 573 591 - -
Pte9g00048 603 MobiDBLite consensus disorder prediction 568 603 - -
Pte9g00048 603 MobiDBLite consensus disorder prediction 62 84 - -
Pte9g00048 603 MobiDBLite consensus disorder prediction 137 160 - -
Pte9g00048 603 PANTHER TESMIN/TSO1-RELATED 53 553 IPR028307 -
Pte9g00048 603 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 245 280 IPR005172 -
Pte9g00048 603 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 159 194 IPR005172 -
Pte9g00048 603 MobiDBLite consensus disorder prediction 420 483 - -
Pte9g00048 603 ProSiteProfiles CRC domain profile. 158 282 IPR005172 -
Pte9g00048 603 MobiDBLite consensus disorder prediction 432 478 - -
Pte9g00048 603 SMART CXC_2 157 197 IPR033467 -
Pte9g00048 603 SMART CXC_2 242 283 IPR033467 -
Pte9g00048 603 MobiDBLite consensus disorder prediction 129 161 - -
Pte9g00048 603 MobiDBLite consensus disorder prediction 51 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00048 Pte-Chr9 588121 593134 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00048 28 563 CPP Transcription Factor Family AT4G29000 53.091 7.57e-179 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pte9g00048 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00048 - - qsa:O6P43_007909 743.421