Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00041 ATGAAGTCCGTGGATAATGATAATGATAACTCTAACAACCATAGTAACTGGTTGGGGTTTTGTCTTTCACCTCAAATGATCATGGGTGTTTCATCAAACCCTCATCATGAGTTTCAATCTTCTGCTCCTGCTTCCTCTGCACCAGCAAGCATTTTACCGTGCCAACCTTATGGGATGAACTATGGTGTCTACTACGGAGTTGACGGTGACAATGGTTACTTGTATTCACCTTTATCAATGATGCCAGTCAAATCTGATGGCTCCCTTTGCTTAATGGAAGAACTTGGCAAGTCAAAGTCACAAGGGATTGTAGCAGCTGCAACTCCAAAAAAGGATTTTTTTGGTGGTGGTGCAATGGCCACCCATCACTATGAATGCAATGCTAGAGATGCCATGGGCTTGAGCTTGGACAGCATGATTTACAATCAATCCCCACCATGTGAGCAGGAAAGCCAAAAGTGCCTGAACCAACTTCAGCATAATCCTAGAAACCGAGAACAAGAGCACTTTGGTTACTACTCAGGGTACAGAAGTCATGATATGATGTTGGACGCAACTAAGCAAAACCATTTTTCTGACTGCAACCTCCAGCTTCCAACAATGGCTGGAAGGGGAGTTCCTGCTTTGAAAAGCTGGGATTTAAGGAACAGTAGTGCTAACCAGGCATCGGAACAGAGAATAGTTGGGCTAGAAGAAGAGAGTGGAGGTGAGTCTGGATCTCTTGGTGCAATGACATTTGGGGATTTGCAGACATTAAGTTTGTCTGTAAGCCCTGGTTCCCAATCAAGCTGTGTGACTAACTTACAGCACACATCTACTGTCACTGATATTGTCGTTGCTGATTCAAAGAAAAGAGGATCTGGAAAGCTGGAACAGAAGAAGATTGTTCATAGGAAATCATTGGATACATTTGGTCAAAGAACCTCTCAGTATAGAGGGGTGACAAGGCATAGATGGACAGGTAGATATGAAGCTCATCTATGGGACAACAGCTGCAAGAAAGAGGGCCAAAGCAGGAAAGGCAGGCAAGGGGGTTATGATATGGAAGAAAAAGCTGCAAGAGCTTATGATCTGGCTGCACTCAAGTATTGGGGTCCCTCCACTCATATCAATTTCCCATTGGAAAATTACCATAAAGAACTTGAAGAGATGAAGAACATGACAAGACAAGAATATGTTGCTCATTTGAGAAGAAAAAGCAGTGGATTCTCAAGAGGCGCTTCCATGTACAGAGGAGTCACAAGACATCATCAACATGGACGATGGCAAGCTCGGATTGGCAGGGTGGCCGGAAACAAAGATCTTTATCTTGGAACATTCAGCACCCAAGAGGAAGCAGCTGAAGCTTATGACATTGCAGCTATTAAATTTCGTGGGTTAAATGCAGTGACCAATTTTGATATATCAAGGTATAATGTTGAAAGGATCATGGAAAGTAGTACCCTTCTTGCTGGTGAACTGGCTAGGCGAAACAAGGATCCAGCGTCGCAAACTGAAGCTTTGACGCAGTATGGTCATGCAGAAGGTAATGCAAAAGAGATCATGTTCCCAGAGAACAATGGATGCAAGTCGGACTGGAAAATGGTTCTTTATCAAACCTCCCAACAAATTGATCAGAAGCAACTGAATCTTGAGACTTTTGGAGGTCTTTCCTTCTCTATAGATACAAATAGTACTAGTCATGAAGTAGAGGAGTCAGCTAAGTTGGGTGGTCATGTTTCCAATGCTTCTTCACTGGTTACTAGCTTGAGCAGTTCAAGGGAGGTTAGCCCAGATAAACCCAGCTTGCCGACATTGCTTGGAATGCAAGCAACGGAGTCCAAGTTATATACTAGTCCTAATAGTAATATGAACCACTGGCCTTCAGCTGCTACTGCTCAATTGAGGCCTGCACTTTCATTGCCTCAGGTTCCGATATTTGCTGCTTGGACAGATGCATAG 1941 0.4364 MKSVDNDNDNSNNHSNWLGFCLSPQMIMGVSSNPHHEFQSSAPASSAPASILPCQPYGMNYGVYYGVDGDNGYLYSPLSMMPVKSDGSLCLMEELGKSKSQGIVAAATPKKDFFGGGAMATHHYECNARDAMGLSLDSMIYNQSPPCEQESQKCLNQLQHNPRNREQEHFGYYSGYRSHDMMLDATKQNHFSDCNLQLPTMAGRGVPALKSWDLRNSSANQASEQRIVGLEEESGGESGSLGAMTFGDLQTLSLSVSPGSQSSCVTNLQHTSTVTDIVVADSKKRGSGKLEQKKIVHRKSLDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQSRKGRQGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYHKELEEMKNMTRQEYVAHLRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDISRYNVERIMESSTLLAGELARRNKDPASQTEALTQYGHAEGNAKEIMFPENNGCKSDWKMVLYQTSQQIDQKQLNLETFGGLSFSIDTNSTSHEVEESAKLGGHVSNASSLVTSLSSSREVSPDKPSLPTLLGMQATESKLYTSPNSNMNHWPSAATAQLRPALSLPQVPIFAAWTDA* 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00041 646 CDD AP2 309 373 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 SUPERFAMILY DNA-binding domain 309 375 IPR016177 GO:0003677
Pte9g00041 646 CDD AP2 408 469 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 ProSiteProfiles AP2/ERF domain profile. 409 467 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 191 540 - -
Pte9g00041 646 Gene3D AP2/ERF domain 409 469 IPR036955 GO:0003700|GO:0006355
Pte9g00041 646 Gene3D AP2/ERF domain 309 375 IPR036955 GO:0003700|GO:0006355
Pte9g00041 646 SMART rav1_2 409 473 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 SMART rav1_2 310 379 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 SUPERFAMILY DNA-binding domain 408 469 IPR016177 GO:0003677
Pte9g00041 646 FunFam AP2-like ethylene-responsive transcription factor ANT 309 375 - -
Pte9g00041 646 PRINTS Ethylene responsive element binding protein signature 311 322 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 PRINTS Ethylene responsive element binding protein signature 449 469 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 Pfam AP2 domain 410 459 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 Pfam AP2 domain 310 365 IPR001471 GO:0003700|GO:0006355
Pte9g00041 646 FunFam AP2-like ethylene-responsive transcription factor 408 469 - -
Pte9g00041 646 ProSiteProfiles AP2/ERF domain profile. 310 373 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00041 Pte-Chr9 518993 522433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00041 390 647 AP2-EREBP Transcription Factor Family AT4G37750 27.090 2.85e-15 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Pte9g00041 AP2 4.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00041 K09285 - qsu:112030198 809.675