Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00029 ATGACTGCCCATGACATTGACAGTGGAACAGGTGATGAAGAGGATGATTATGATGGTGGTGGTGGTGGTGGTGGTAATGAAGTTCAGGACGAGGTAAAGGAGGAACAAGATGACAAATTTTCGAATGGGCCAGTGTACACCGGAAAAGAGGACAAGGAATATGATAAAGACCCAGAACTTGCTGATATTCTCGGGACTTGTCTTGAGGACCCGCAAAAGGCGCGGTCTAAAATGGAGGAAAGATTGAGAAAGAAAAGGAACAAGATATTGCACACCAAGACTGGGTCAGAGGTTCCACCCAAAGTCATTTTCAACAAGTTTGATTTCTCAAGTTCATATATATGGTTAGAATTTTACAATGCCCCTCTGGAAAAGGATATTTCTTTGATATGTGATATTATCAGAGCATGGCATATTATTGGACGTCTTGGTGGATTCAATTCTATGAATATGCAGCTATCCCAGTCTTCTTTGGATAAAAGACTAAATTATGATGCTACTCGGGGAGCAAACATGTCACAAACTACTTTTTACAACATTGGGGATCTCCAGGTCCAAGACAACTTAGCACGGATATGGGTAGATATTGGAACGAGTGAACCGCTGCTCCTGGACGTTCTTATTAATGCACTGACTCAAATAAGCTCTGAGTATGACCTGAACTTACTCCATACTTTCTCATTCTTATTTTTACTGCTTCTTGGTATAAGAAAATTGATTGGAAGTGGCTTGGTTCGTGAGAACAAGCAGTGGGGCTATATTGTGATCACTACCCCTGAAGGCGTTTTGGATCATGAAGAGGCTATTAGAAGAAATATAGGCGGTCAGGTTCTCGGTTATTTTAATTAG 849 0.4111 MTAHDIDSGTGDEEDDYDGGGGGGGNEVQDEVKEEQDDKFSNGPVYTGKEDKEYDKDPELADILGTCLEDPQKARSKMEERLRKKRNKILHTKTGSEVPPKVIFNKFDFSSSYIWLEFYNAPLEKDISLICDIIRAWHIIGRLGGFNSMNMQLSQSSLDKRLNYDATRGANMSQTTFYNIGDLQVQDNLARIWVDIGTSEPLLLDVLINALTQISSEYDLNLLHTFSFLFLLLLGIRKLIGSGLVRENKQWGYIVITTPEGVLDHEEAIRRNIGGQVLGYFN* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00029 282 SUPERFAMILY Ribosomal protein S8 237 281 IPR035987 GO:0003735|GO:0005840|GO:0006412
Pte9g00029 282 MobiDBLite consensus disorder prediction 28 56 - -
Pte9g00029 282 Gene3D - 234 281 - -
Pte9g00029 282 ProSitePatterns Ribosomal protein S8 signature. 252 269 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pte9g00029 282 Pfam Protein of unknown function (DUF3531) 101 218 IPR021920 -
Pte9g00029 282 PANTHER OS02G0827600 PROTEIN 27 218 - -
Pte9g00029 282 Pfam Ribosomal protein S8 248 280 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pte9g00029 282 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00029 Pte-Chr9 392471 399064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00029 248 283 Cytoplasmic Ribosomal Protein Gene Family AT2G19720 77.778 3.59e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00029 - - qsa:O6P43_003927 303.908