Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00025 ATGAGTCAAAAGAATCTTGTCAAGGAGAAAGGCCACTCAGATTTTGCTGGGAAGGTGGTATTGGTTGCTGTCAAAGCTTCAAAGGAAATTCCAAGAGCTGCTCTAGTTTGGGCATTGACTCATGTTGTTCAACCCGGGGATGTCATCAAGTTATTGGTGGTTCTTCCTACATTCTCAGCAGGGATTAGGGGTTTTGCAAGATTCACAACTGATTGCACCATCAGTCACAGAAGATCCTTCGCTGGAACTGCCTCAGACCAGAAGGAGTACATAGCAGATTCTTGCTCTCAATTGGTGCTCCAACTTCATGAACTCTACGATCCAGAGAAGGTTAAGATTAGGATAAAAATTATTTCTGGTTCTTCTTTTGGAGTGGTGGCTGCTGAAGCCAAGAGAGTCCACTCCAGCTGGGTTATCTTGGACAAAAAATTAAAACAGGAAAAGAGAGCTTGCATGGAGGAACTGCAGTGCAATGTTGTTGTTATGAAGCGATCTCAGCCAAAGGTTCTTCGATTAAACTTGACTAAATCGCCATATATGGAGGCTAAAGAAGTTCACTGTATGATTCCCGAGTCAGATTCTTTCCAAAACATTGCAGGCAAATGTGAAAACATAGAAACAATCAAAGGTCCAGCTGTTACTCCAGCTGGTAGTCCAGATCAAGGATCGCCATTAACTATGACTGACGTTGGAACTTCCTCAATGTCAAGCTCAGACCCTGGAATGTCACCATTTTTCTGTTCTGCAATTTCTGTAAGCTTAAACAAAGATTTCAAATTTTTAAATGAAGTAAGCAGAAACCTGGAAGATTCTACTTCTGATTCCGAGTGCGATAATGTTAGTATGTGCTCTGCAAGTTCATATTTTGAGCCATGGACAGTAAATAAGCTCAGTATGGACGCCAAAATGTCAACCTGTGAGGACCTTTGCACTGAAAAATTCTATAGTAAGGATTTTAGCTCTTCCTATGAAGCCTTCTTGAAGAAATTCTTGAAGATGGACCAGCAACAAGGTATGAAAATTCCAAATTATAGAATTGGTGGAGACATAACCAGAAGTGTGAGGGAAGCAGTTTCACTGGCGAGACGTGCACCCCCTGGTCCTCCCCCATTGTGTTCTATTTGTCAGCACAAGGCACCTGTATTTGGTAATCCACCAAAATGGTTTACCTTTGCTGAACTGGAACATGCAACCCAGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGTGGATTCGGTTCCGTACACCGTGGTGTATTACCTGGTGGTGTAGTCATTGCTGTGAAACAATACAAGTTGGCCAGTTCTCAAGGTGACAAAGAATTTTGTTCAGAAGTTGAGGTCTTGAGCTGTGCTCAGCATCGCAATGTTGTCATGCTGATTGGATTTTGTGTTGAGGATGGAAGGAGGTTACTGGTTTATGAATACATATGCAATGGGTCTCTGGATTCTCATCTCTATGGGAGAAGAAATCCTCCACTGGAATGGTCTGCTCGACAAAAAATTGCTGTTGGCGCCGCCCGTGGACTGAGATATCTTCATGAAGAATGTAGAGTGGGATGCATCGTGCATCGTGATATGAGGCCTAATAACATCTTACTCACCCATGATTTTGAACCATTAGTTGGGGATTTTGGTCTGGCAAGGTGGCAGCCAGATGGACATGAGGGAGTAGAAACTAGAGTGCTTGGAACATTTGGGTACTTGGCTCCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTTTATTCCTTTGGAGTTGTGTTGCTAGAGCTGGTTACTGGAAGGAAAGCCATTGATTTAAACAGGCCCCGAGGACAGCAATCACTTACTGAATGGGCACGGCCATTGCTTGAAAAACACGCTATTGAACTGATTGATCCGCACCTAAGGAACTCCTATGGAGAGCAAGAGATTCTTGACATGCTGAAATGCTCAGCACTGTGCATCCGACATGATCTTCATTCAAGGCCTCGCATGTCTCAGGTTCTCAGAATGCTGGAAGGTGACAAATGA 2025 0.4321 MSQKNLVKEKGHSDFAGKVVLVAVKASKEIPRAALVWALTHVVQPGDVIKLLVVLPTFSAGIRGFARFTTDCTISHRRSFAGTASDQKEYIADSCSQLVLQLHELYDPEKVKIRIKIISGSSFGVVAAEAKRVHSSWVILDKKLKQEKRACMEELQCNVVVMKRSQPKVLRLNLTKSPYMEAKEVHCMIPESDSFQNIAGKCENIETIKGPAVTPAGSPDQGSPLTMTDVGTSSMSSSDPGMSPFFCSAISVSLNKDFKFLNEVSRNLEDSTSDSECDNVSMCSASSYFEPWTVNKLSMDAKMSTCEDLCTEKFYSKDFSSSYEAFLKKFLKMDQQQGMKIPNYRIGGDITRSVREAVSLARRAPPGPPPLCSICQHKAPVFGNPPKWFTFAELEHATQGFSQANFLAEGGFGSVHRGVLPGGVVIAVKQYKLASSQGDKEFCSEVEVLSCAQHRNVVMLIGFCVEDGRRLLVYEYICNGSLDSHLYGRRNPPLEWSARQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEPLVGDFGLARWQPDGHEGVETRVLGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGRKAIDLNRPRGQQSLTEWARPLLEKHAIELIDPHLRNSYGEQEILDMLKCSALCIRHDLHSRPRMSQVLRMLEGDK* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00025 674 ProSitePatterns Tyrosine protein kinases specific active-site signature. 522 534 IPR008266 GO:0004672|GO:0006468
Pte9g00025 674 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 477 674 - -
Pte9g00025 674 MobiDBLite consensus disorder prediction 212 239 - -
Pte9g00025 674 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 373 476 - -
Pte9g00025 674 SUPERFAMILY Protein kinase-like (PK-like) 381 671 IPR011009 -
Pte9g00025 674 ProSiteProfiles Protein kinase domain profile. 401 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte9g00025 674 MobiDBLite consensus disorder prediction 219 239 - -
Pte9g00025 674 Gene3D Phosphorylase Kinase; domain 1 373 476 - -
Pte9g00025 674 Pfam Protein tyrosine and serine/threonine kinase 405 670 IPR001245 GO:0004672|GO:0006468
Pte9g00025 674 Gene3D Transferase(Phosphotransferase) domain 1 477 674 - -
Pte9g00025 674 PANTHER OS01G0750732 PROTEIN 159 673 - -
Pte9g00025 674 CDD STKc_IRAK 407 672 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00025 Pte-Chr9 332956 337261 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte9g00025 381 673 Trihelix Transcription Factor Family AT1G70460 52.492 6.94e-101 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pte9g00025 PK_Tyr_Ser-Thr 1.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00025 - - qsa:O6P43_003911 926.776