Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte9g00023 ATGGGGAGGAGGTGCTCACAATGTGGAAACATAGGACACAATTCAAGAACATGCTCAGCCTTCAGAAGGTCTTATAATGGTCTTAGACTGTTCGGCGTTCAGCTAGACTTACCTTCATCTTCCGTTGCCATCAAGAAAAGTTTTAGCTTGGACTGCTTTCCATCATCCTATTCTCCGTCTTCTTCATTTTCTTCATCACATATGGCCCTTGAAAAGAATTCTTCTGACAGAAGATCTCTAGGTTATCTATCTGATGGCGGACAGCAAGCAAGGAAGAAGGGAGTTCCATGGACAGAGGAAGAGCATCGGACATTCCTCATTGGCCTACAGAAGCTAGGAAAAGGTGATTGGAGGGGTATCTCTAGAAGCTACGTTACCACAAGAACCCCAACCCAAGTGGCTAGTCATGCTCAAAAATACTTTGTTAGACTGGCCAACCCAAGCAAGAAGAAGAGACGGTCAAGTCTTTTTGACATGGCGGGCAGGAACAGCAACAGTAATAGCAATAATAACAAGATGGCAGATACAAGGTCGAGTCATGAAGAACATAATGGACAGTCTCAAGTAGCCCTTGGAGAAGGCGCTGTGCCCATTTGGCCGTATGAATCGGTGGATGCTAAAGACAAATCTTCACTGAGTTCACTCATTGCAACAGTACCTAATCTTGAGCTGAACCTCGCAGCTCCAAAGACTCCAGAACAAAATCAATCATCTTCCTGTCCCCTCGTATTATGGGCAAGTTAA 744 0.4489 MGRRCSQCGNIGHNSRTCSAFRRSYNGLRLFGVQLDLPSSSVAIKKSFSLDCFPSSYSPSSSFSSSHMALEKNSSDRRSLGYLSDGGQQARKKGVPWTEEEHRTFLIGLQKLGKGDWRGISRSYVTTRTPTQVASHAQKYFVRLANPSKKKRRSSLFDMAGRNSNSNSNNNKMADTRSSHEEHNGQSQVALGEGAVPIWPYESVDAKDKSSLSSLIATVPNLELNLAAPKTPEQNQSSSCPLVLWAS* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte9g00023 247 Pfam Myb-like DNA-binding domain 96 141 IPR001005 -
Pte9g00023 247 SUPERFAMILY Homeodomain-like 90 145 IPR009057 -
Pte9g00023 247 MobiDBLite consensus disorder prediction 158 174 - -
Pte9g00023 247 FunFam transcription factor MYB1R1 95 146 - -
Pte9g00023 247 ProSiteProfiles Myb-like domain profile. 89 141 IPR001005 -
Pte9g00023 247 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 89 145 IPR017930 -
Pte9g00023 247 MobiDBLite consensus disorder prediction 77 97 - -
Pte9g00023 247 PANTHER TRANSCRIPTION FACTOR KUA1 3 188 - -
Pte9g00023 247 MobiDBLite consensus disorder prediction 151 191 - -
Pte9g00023 247 NCBIfam myb-like DNA-binding domain, SHAQKYF class 92 143 IPR006447 GO:0003677
Pte9g00023 247 ProSiteProfiles Zinc finger CCHC-type profile. 3 18 IPR001878 GO:0003676|GO:0008270
Pte9g00023 247 CDD SANT 96 141 IPR001005 -
Pte9g00023 247 Gene3D - 95 146 - -
Pte9g00023 247 SMART sant 93 143 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte9g00023 Pte-Chr9 319558 321251 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte9g00023 Myb_DNA-binding 8.3e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte9g00023 - - qsa:O6P43_007819 272.707