Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01298 ATGGCAAAGAAGAAAAATCCTTTGGTTTATATGGATGTTTCTATAGATGGCGATCCAGTTGAAAGAATGATATTTGAGCTTTTTACTGACGTAGCTCCAAAGACCGTGGAAAACTTTCGTGCCCTTTGCACAGGAGAGAAAGGAATTGGTCCAAAAACTGGAAAACCCCTACACTACAAGGGCTCTTTTTTCCATCGCATTGTGAAAGGATACTATGTTCAGGGTGGTGATTTTGTCAACCGGAATGACATGGAATTGAGCCTTCTTAAGTCCATAATGCCTATGGAATGGCCTGATGTACTGGTGGGGAAAGTATTTATGGAGCCAAGTTCCCAGGTAAGAATCACAGATGTTTGCATATCATTAGAATCCGTGTATGATGTGGATGAATCTGTCAAAAGAGATGAGTCACCTAAGCTTAAGCATGATGAACGGGGCATGCTGTCTATGCCAATTGCTGACCGTGACACCCTTGGTTCACATTTTATCATATCTTTCAAAGCTGATCATAATCTTGACAGAAAGCATGTAGTTTTTGGGAAACTTGTTCAGGGACTTGATGTATTACAGAAAATCGAAGATGTTGGCGATGAAGAAGGGTATCCAACTGTAACTGTTAAAATAATATACTGTGGTGAATATGTTGAAGATAAGAAGAGAGCAAATAAATCAAAAGCAGGGAAGGATGCTGCTTCTGAGGGGAACAATAACGATCCAAAACGGAGAGGAAAGCATAAAAAATCATCTAGAGACAAAAAGAAGAGGAGAAGAAGATACTACACTGATTCAGATACTTCCTCTGATTCGGAGATGGAATCTACAGAGTCTGATACTGATTCTGACTCTGATTCATATTCATCCTCATCTTCTGATGCCAGTTCCTCAGCAGATGACAAGCGAAGGAAAAGAAAAAGATCTTCTAGAAAAGGCAAGCATAGACGTGGGAAAAGAAGGGACAGAAGACATGATAAGAAACGTAGACGACGAGATAAAAGGTCGAAGCGTCGATCAAAAAGGGCATCAGAAAGTCTTTCAGACACTGACAGTGATAGTGGAAGTGGCAATAGCTCTGAAAGTGATGGTGCTGACATCAATGGTAAAGAGAAGCGTAACGATCAGTTGCAGAAATACGTGGAGAAGGAAGAAATTTTTGACCTTTCTAAAGATGCAAATGGAGGAGGATCCCCAAAGGAAAATGGACAGAACAGGGTTAGTGGCACTGCAACAGACTCTAAATCTGGTAGGAGTGAAGATAGACAACCTGATGTGGTTGATGATCATCCAGGCAAATCTAGGAGCCGAAGCATGAGTCCGAGGAGAGCCGTGAGTAAGAGTATGAGTATTAGCCCTCGGAGAAGTGTAAGCAGAAGTCCTATTGCTGGACAAAAAGGGAGCATTAGCCAATTTCCTCGTGCTCCGTCCAGAAGTATCAGCCGGAGCAAGAGTCCTGACCAAAAAATCAGAAGAAGTCCTAGCAGAAGCCCTGTCAGAAGTCCTAGTAAAAGTCCTGTAAGAAGTATCAGCCAGAGTCCAAGAGAGAGTGACAGTGGTAGTCCAATAAGGGGTAGGAAGGGTAGAAGTGACAGTAGGAGCCCCATAAGAGCACAGTCCTGTAGAAGGTCAAGTGGGAGTTCCCAAAGAAGCCCAAGTACGACACCTCCAAGAACATGGTCACGGAAGTCAGTAAGCAGAACACCTGCAAGAGTTCTGAGGAAAAGCAAGAGTAAAAGTAGAAGTCCAGTTAGATCCTCTGCGAGAAGCTTAAGCCGAAGCTCTGGGAGGGGCTATTTGAGGAGAAGCGTTAGCCGAAGTCCAATTAGGCTCACTAGCAGAACTAATCGCCATAGTTATTCGAAGAGTCCCAGTCCTGTACGAAGGCCAAGGTCAACTACTGATCGAGGGAGGACTCTATCAAGGAGCATATCACCAGCTTCTTCGCCCAAGCGTGTCCGGAGAGGGAGGGGTTTTAGCGACCGATTCTCATATGCTAGAAGGTATAGAACACCTTCTGTCTCACCTCCCAGATACCGTTACAATGGAAGAAGTGACCGTGACAGGTATTCAAGTTACAGGAGATATTCCCCTCAAAGGCGTAACAGAAGCCCAATAAGGACAAGAAGTCCAAGGTATAGAAGTAGAAGAAGCAGGACACCCTCTGTTTCCCGTAGCCCAAGATATCGCCGCCGTTATAGCCGGAGTCCTAGCCATAGCCGTAGTGCCATCCGCAATCGAAGTCGCAGTCCGGTCCGATGCGCTAGTCCCAGCCCAAGTCGTAGCTGTAGTAGTAGTCCAGTTCAATATCGCAGTGAGAGGCGCAAGTCGCCTTCTAGGAGTAGGAGTCCATCTGATTCAAAGTCTCCATATCTGGGTCTCCTTGAAAGGTAA 2385 0.4491 MAKKKNPLVYMDVSIDGDPVERMIFELFTDVAPKTVENFRALCTGEKGIGPKTGKPLHYKGSFFHRIVKGYYVQGGDFVNRNDMELSLLKSIMPMEWPDVLVGKVFMEPSSQVRITDVCISLESVYDVDESVKRDESPKLKHDERGMLSMPIADRDTLGSHFIISFKADHNLDRKHVVFGKLVQGLDVLQKIEDVGDEEGYPTVTVKIIYCGEYVEDKKRANKSKAGKDAASEGNNNDPKRRGKHKKSSRDKKKRRRRYYTDSDTSSDSEMESTESDTDSDSDSYSSSSSDASSSADDKRRKRKRSSRKGKHRRGKRRDRRHDKKRRRRDKRSKRRSKRASESLSDTDSDSGSGNSSESDGADINGKEKRNDQLQKYVEKEEIFDLSKDANGGGSPKENGQNRVSGTATDSKSGRSEDRQPDVVDDHPGKSRSRSMSPRRAVSKSMSISPRRSVSRSPIAGQKGSISQFPRAPSRSISRSKSPDQKIRRSPSRSPVRSPSKSPVRSISQSPRESDSGSPIRGRKGRSDSRSPIRAQSCRRSSGSSQRSPSTTPPRTWSRKSVSRTPARVLRKSKSKSRSPVRSSARSLSRSSGRGYLRRSVSRSPIRLTSRTNRHSYSKSPSPVRRPRSTTDRGRTLSRSISPASSPKRVRRGRGFSDRFSYARRYRTPSVSPPRYRYNGRSDRDRYSSYRRYSPQRRNRSPIRTRSPRYRSRRSRTPSVSRSPRYRRRYSRSPSHSRSAIRNRSRSPVRCASPSPSRSCSSSPVQYRSERRKSPSRSRSPSDSKSPYLGLLER* 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01298 794 MobiDBLite consensus disorder prediction 301 336 - -
Pte8g01298 794 Gene3D - 1 214 IPR029000 -
Pte8g01298 794 MobiDBLite consensus disorder prediction 736 769 - -
Pte8g01298 794 SUPERFAMILY Cyclophilin-like 4 215 IPR029000 -
Pte8g01298 794 MobiDBLite consensus disorder prediction 220 794 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 436 480 - -
Pte8g01298 794 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 11 212 IPR002130 GO:0000413|GO:0003755
Pte8g01298 794 MobiDBLite consensus disorder prediction 362 387 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 697 735 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 678 692 - -
Pte8g01298 794 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 213 IPR002130 GO:0000413|GO:0003755
Pte8g01298 794 MobiDBLite consensus disorder prediction 412 433 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 346 361 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 492 516 - -
Pte8g01298 794 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 174 189 IPR002130 GO:0000413|GO:0003755
Pte8g01298 794 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pte8g01298 794 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 161 IPR002130 GO:0000413|GO:0003755
Pte8g01298 794 MobiDBLite consensus disorder prediction 394 411 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 241 256 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 580 625 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 565 579 - -
Pte8g01298 794 MobiDBLite consensus disorder prediction 531 563 - -
Pte8g01298 794 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01298 Pte-Chr8 36825620 36831046 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01298 25 215 U-box Gene Family AT5G67530 29.167 1.65e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01298 K09566 - gmx:100785820 284.648