Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01278 ATGTCGTTGCAGAATATTGGTGCATCAAACCGTGATGATGCCTTCTACAGGTATAAGATGCCAAAGATGGTTACTAAGATTGAAGGTAGAGGGAATGGCATCAGAACTAATGTGGTTAACATGGTTGACATTGCCAAGGCCTTAGCCAGACCTGCTTCTTATACCACCAAATATTTTGGCAATGAACTTGGAGCTCAATCCAAGTTTGACGATAAGACAGGAATTTCTCTTGTCAATGGGGCCCATGATACAGTAAAACTTGCGGGCTTGCTGGAGAATTTCATCAAGAAATACGTTCAATGTTATGGCTGTGGGAACCCTGAGACAGAGATTGTTATTACAAAGTCACAGATGATCACCCTAAAATGTGCTGCATGTGGTTTTGTTTCTGATGTTGATATGAGGGATAAGCTTACTACATTTATTCTTAAAAATCCTCCTGAGCAGAAAAAAGGATCCAAAGATAAGAAGGCCATGAGGAGGGCGGAGAAAGAGAGACTTAAGGAGGGAGAAGTGGCTGATGAGGAGCTAAAGAAGCTCAAAAAGGAGACAGGGAAGAAGAAAGTGTCTTCAAAGGATCCTGCTACGAAGACATCAAAGAAGAAGGGCAATGTTTCTGATGAGGATCACTCTCCTGATCTCAGTATGGCTGATGAATATGAAACAGCAAATGCTGATGATGAAGATGGAGTGGAATGGCAGACTGACACTTCCCTTGAAGCTGCTCGACAGCGTATCCAGGAACAGTTGAGTGCTGTTACTGCTGACATGGTTATGCTCTCTACAGATGAGGAGAAGAAAAAGTCATCGAAACAGTCTCCTGACCGTGAAGCAAAACCAGACAAAGATAATGGGAATGATGTTACCCATGGGAAGCTTGTTGAGGACATAAAGGATCATCTATGCAAAGGTTGCTCTGCAAACCAGCTTAAATCTTATCTTGGATCTCTCCCTGGGAGTTCTCAAGAGGTTACTGATGCCTTGTTTGAAGCTCTATTTGACAATGTTGGCAAGGGTTTTGCCAAAGCAGCAATGAAGAAAAACAACTATCTGGCTGCGGCAACTCAAGTAGGTTCACAGATGATTTTGTTGCATGCTATCGAGTCATTCTGTATGAAGGCGAGCCCTGATGCTGTAAAGGAAGTGGCTTTGATTTTGAAGGACCTGTATGACTCCGATGTGCTGGAGGAGAAGTCGATACTGGAGTGGTATCGACAGGGTTTGTCTGGCAGTAACAAAAGCTCTCAGGTATGGATAAGTGTCAAGCCATTTATTGAATGGCTCCAGAATGCTGAATCCGAAACAGAAGAAGAATGA 1317 0.4313 MSLQNIGASNRDDAFYRYKMPKMVTKIEGRGNGIRTNVVNMVDIAKALARPASYTTKYFGNELGAQSKFDDKTGISLVNGAHDTVKLAGLLENFIKKYVQCYGCGNPETEIVITKSQMITLKCAACGFVSDVDMRDKLTTFILKNPPEQKKGSKDKKAMRRAEKERLKEGEVADEELKKLKKETGKKKVSSKDPATKTSKKKGNVSDEDHSPDLSMADEYETANADDEDGVEWQTDTSLEAARQRIQEQLSAVTADMVMLSTDEEKKKSSKQSPDREAKPDKDNGNDVTHGKLVEDIKDHLCKGCSANQLKSYLGSLPGSSQEVTDALFEALFDNVGKGFAKAAMKKNNYLAAATQVGSQMILLHAIESFCMKASPDAVKEVALILKDLYDSDVLEEKSILEWYRQGLSGSNKSSQVWISVKPFIEWLQNAESETEEE* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01278 438 Gene3D - 290 438 - -
Pte8g01278 438 MobiDBLite consensus disorder prediction 143 214 - -
Pte8g01278 438 Gene3D - 105 145 - -
Pte8g01278 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 437 IPR045196 GO:0003743|GO:0006413
Pte8g01278 438 CDD W2_eIF5 287 436 - -
Pte8g01278 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Pte8g01278 438 SMART 542_3 348 434 IPR003307 GO:0005515
Pte8g01278 438 SUPERFAMILY ARM repeat 291 432 IPR016024 -
Pte8g01278 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Pte8g01278 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Pte8g01278 438 Gene3D - 2 104 - -
Pte8g01278 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Pte8g01278 438 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Pte8g01278 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Pte8g01278 438 ProSiteProfiles W2 domain profile. 274 438 IPR003307 GO:0005515
Pte8g01278 438 MobiDBLite consensus disorder prediction 148 214 - -
Pte8g01278 438 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Pte8g01278 438 MobiDBLite consensus disorder prediction 262 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01278 Pte-Chr8 36643336 36645869 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01278 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 63.348 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01278 K03262 - jre:109021983 645.966