Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01260 ATGGGTCATTCAACTAATCCTGAGCTTGAGAAAAGAGATATGGAGGAAACGAATCCATCACCTTCGCATGTAGCAAATGGGCCATACATCCACAGAGTAGGAATTCCACCCAAGCAAAATTTCTTTAACGAGTTCATATCTTCTGTGAAGGAAACATTATTTGCTGATGATCCTCTACGTCCCTTCAAAGACCAAAGTAAATCTCGCAAGTTCATCCTCGGAATAGAGGCTATCTTTCCCATCGTTGAATGGGGAAGAAGTTACACTCTTGCAAAATTTCGAGGCGACATCATTGCCGGACTAACAATTGCAAGTCTCTGCATCCCTCAGGACATTGGATACTCAAAACTTGCAAATTTGGCACCACAATATGGATTATACTCCAGCTTTGTCCCGCCATTAATTTATGCTGCCATGGGGAGTTCTCGTGATATAGCCGTTGGACCTGTGGCCGTGGTGTCTCTCTTGTTAGGGACCTTGTTGCAGAATGAAATTGATCCGGTTAAAAATGCAGCAGATTATCGGCGGCTCGCATTTACAGCAACATTTTTCGCTGGGATCACACAAGCTACTCTTGGGGTTCTTAGATTAGGTTTCTTGATTGACTTCCTATCACATGCTGCCATTGTCGGTTTCATGGGAGGTGCTGCAATCACAATTGCCCTTCAACAGCTCAAGGGTTTTCTTGGCATCACAAAATTCACGAAGAAAACTGACATTATTTCTGTGATGAATTCAGTATTTTCCTCAGCTCACCACGGATGGAACTGGCAAACTATATTTATTGGAGCAACCTTTTTGGCTTTTCTTCTCTTTGCAAAATACATAGGGAAAAGGCACAAGAAACTATTCTGGGTGCCTGCAATTGCTCCATTAATATCGGTTGTGTTATCCACATTTTTCGTGTTCATAACTCGTGCAGATAAACATGGCGTTGAGATTGTGAGACATATAGACCAAGGAATCAACCCCTCATCAGTGAGCCAACTATATTTCAGTGGAGAAAATCTAGCAAAAGGATTCAAAATTGGAATTATAGCTGGTATGATCGCATTGACGGAAGCCGTAGCAATTGGAAGAACGTTTGCTGCTAAGAAAGACTACCAATTAGATGGAAACAAAGAAATGGTGGCTTTAGGTGCTATGAATGTTGTCGGTTCACTTACTTCTTGCTATGTAGCTACAGGTTCATTCTCAAGGTCAGCAGTGAACTACATGGCAGGCTGCCAGACTGCAGTCTCCAACATCGTGATGTCTTGCGTTATATTTTTGACATTGCAATTCATCACACCTCTATTTAAGTACACTCCAAATGCCATTCTCGCCTCAATCATAATAGCAGCTGTCATCGGTCTGATTGACTTTCAGGCAGCAATATTGATATGGAAGATTGATAAATTTGATTTCATTGCTTGTTTGGGAGCCTTCTTAGGAGTTGTCTTTGCTTCAGTGGAAATTGGGCTTCTAATAGCTGTTTGTATATCTTTTGCGAAGATTCTCTTCCAAGTTACAAGACCAAGAACTGCAATCCTTGGTAAGGTTCCTCGGACAACTGTGTACAGAAACATTCAACAATACCCAGAAGCTACGAAGGTTCCTGGTGTTTTGATTGTTAGAGTTGACTCTGCCATATACTTTTCCAACTCCAATTATGTCAAGGAGAGGATATTGAGATGGTTGATGGATGAAGAAGATCATATCACAAGAGACTATCGCCCACCAATACATTTCTTGATAGTTGAGATGTCTCCGGTTACTGACATAGACACAAGTGGAATCCATGCCTTCGAAGAATTATATAGAAGTCTTCAAAAAAGAGATACCAAGCTGGTGCTGGCAAACCCGGGGCCTGCAGTAATCGACAAGCTTCATGCATCAGGTTTTGCAGAGTTGATTGGTGAGGATAAAATCTTCCTTACAGTATCTGATGCTGTTGCACACTGTTCTCCAAAACTGGTTGAAGAAGTCTGA 1971 0.417 MGHSTNPELEKRDMEETNPSPSHVANGPYIHRVGIPPKQNFFNEFISSVKETLFADDPLRPFKDQSKSRKFILGIEAIFPIVEWGRSYTLAKFRGDIIAGLTIASLCIPQDIGYSKLANLAPQYGLYSSFVPPLIYAAMGSSRDIAVGPVAVVSLLLGTLLQNEIDPVKNAADYRRLAFTATFFAGITQATLGVLRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGITKFTKKTDIISVMNSVFSSAHHGWNWQTIFIGATFLAFLLFAKYIGKRHKKLFWVPAIAPLISVVLSTFFVFITRADKHGVEIVRHIDQGINPSSVSQLYFSGENLAKGFKIGIIAGMIALTEAVAIGRTFAAKKDYQLDGNKEMVALGAMNVVGSLTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSCVIFLTLQFITPLFKYTPNAILASIIIAAVIGLIDFQAAILIWKIDKFDFIACLGAFLGVVFASVEIGLLIAVCISFAKILFQVTRPRTAILGKVPRTTVYRNIQQYPEATKVPGVLIVRVDSAIYFSNSNYVKERILRWLMDEEDHITRDYRPPIHFLIVEMSPVTDIDTSGIHAFEELYRSLQKRDTKLVLANPGPAVIDKLHASGFAELIGEDKIFLTVSDAVAHCSPKLVEEV* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01260 656 PANTHER SULFATE TRANSPORTER 40 649 IPR001902 GO:0016020|GO:0055085
Pte8g01260 656 FunFam Sulfate transporter 31 505 651 - -
Pte8g01260 656 SUPERFAMILY SpoIIaa-like 527 649 IPR036513 -
Pte8g01260 656 Gene3D STAS domain 505 651 IPR036513 -
Pte8g01260 656 MobiDBLite consensus disorder prediction 1 27 - -
Pte8g01260 656 NCBIfam sulfate permease 80 644 IPR001902 GO:0016020|GO:0055085
Pte8g01260 656 ProSiteProfiles STAS domain profile. 525 648 IPR002645 -
Pte8g01260 656 ProSitePatterns SLC26A transporters signature. 122 143 IPR018045 GO:0008271|GO:0008272
Pte8g01260 656 MobiDBLite consensus disorder prediction 1 18 - -
Pte8g01260 656 Pfam STAS domain 526 644 IPR002645 -
Pte8g01260 656 Pfam Sulfate permease family 93 473 IPR011547 GO:0016020
Pte8g01260 656 CDD STAS_SulP_like_sulfate_transporter 526 641 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01260 Pte-Chr8 36477019 36482461 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01260 2 657 Inorganic Solute Cotransporters AT1G22150 74.085 0.0 986
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01260 K17470 - qsa:O6P43_015270 1086.25