Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01245 ATGGCTACTGCGTTGGATTTCTACAGTGCTAGTAATAGTACCGTTCAGTCAGATCCAATGAGAGGTGAGCTCATGGAAGCACTTGGACCTTTTATGAAAAGTTCTTCCACAAACAGCTTTCTTTCACCTGCTGGAAATTACTCTCCTTCAACTATGCCCTGTTTTCCAGTACCCTCAACCTCTTACTCTCCTTTATCGGAATACTATTCTTCTTCATACACTTCTCCACCAACCCAGTCCAGTTTGCATCCAACTAGTTGCTCCACCTCGATGAACCCTATTATTTCAGATGGGTTCTCGAATGGCCAAACCCTCTTCGGCTTTGGGCAACCAAGTTCTCTAATTGGACTAAACAACCTTACCCCATATCAGATCAACCAGATCCAAACTCAGATTCAGTTTCAGAACCAACAAAGTCATAACCTTTATTTACATCAAAGCCAGTATAACACACAACAGAATAGTCTTAGCTTTCTGAGTCCTAAACCTGTGTCGATGAAGCGAGTGGGTTCGCCACCAAAACCCACGAAGCTCTACAGAGGAGTCAGGCAACGACATTGGGGGAAATGGGTAGCTGAGATCAGGCTCCCTAGGAACCGTACCCGTCTTTGGCTGGGTACCTTCGATACTGCTGAAGAAGCCGCTCTGGCATACGACAAGGCCGCTTACAAGCTCAGAGGTGACTTTGCAAGGCTGAACTTCCCGAACCTCCGACACCAAGGATCAAGTGTTGAAGGTGATTTCGGAGAGTACAAGCCTCTTCCTTCCTCTGTCGATGCAAAGCTTCAAGCTATCTGTGAAAACTTAGCTGACATGCAGAAACAAGGGAAGTCAGAGAAGTATGTTAGCTCTTCTAAGAGGTCTAATCCAGGGCGGTGCAAGTTGGGGTCGAAAGTAGCCACGGAGGCTCAGCCACAGATGGTGTCTAGTTCTCAGGAAAACTCGGTGGTGACCGACGGGGAAGTGAAAGTTTCTGAATGCTGTTTTAAGGTAGAGGTGTCCTCGTCGCCGCCGTTCTCTGAGAGTGAGGGGTCAGCAGGCTCTTCACCTTTGTCAGAACTCACTTTCCCTGATGTTACCGAGTTCGAATGGGATGTGGGTGCTTCAGGCAACTTCATGCTGGATAAGTGCCCTTCCTATGAGATCGATTGGGCTTCTTTGTGA 1164 0.4759 MATALDFYSASNSTVQSDPMRGELMEALGPFMKSSSTNSFLSPAGNYSPSTMPCFPVPSTSYSPLSEYYSSSYTSPPTQSSLHPTSCSTSMNPIISDGFSNGQTLFGFGQPSSLIGLNNLTPYQINQIQTQIQFQNQQSHNLYLHQSQYNTQQNSLSFLSPKPVSMKRVGSPPKPTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHQGSSVEGDFGEYKPLPSSVDAKLQAICENLADMQKQGKSEKYVSSSKRSNPGRCKLGSKVATEAQPQMVSSSQENSVVTDGEVKVSECCFKVEVSSSPPFSESEGSAGSSPLSELTFPDVTEFEWDVGASGNFMLDKCPSYEIDWASL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01245 387 ProSiteProfiles AP2/ERF domain profile. 178 235 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 PRINTS Ethylene responsive element binding protein signature 179 190 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 PRINTS Ethylene responsive element binding protein signature 201 217 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 SUPERFAMILY DNA-binding domain 178 236 IPR016177 GO:0003677
Pte8g01245 387 Pfam AP2 domain 179 227 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 5 387 - -
Pte8g01245 387 CDD AP2 177 237 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 MobiDBLite consensus disorder prediction 276 315 - -
Pte8g01245 387 FunFam Ethylene-responsive transcription factor 2 177 236 - -
Pte8g01245 387 SMART rav1_2 178 241 IPR001471 GO:0003700|GO:0006355
Pte8g01245 387 Gene3D AP2/ERF domain 178 236 IPR036955 GO:0003700|GO:0006355
Pte8g01245 387 MobiDBLite consensus disorder prediction 277 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01245 Pte-Chr8 36394054 36395940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01245 1 387 AP2-EREBP Transcription Factor Family AT1G78080 48.628 9.85e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte8g01245 AP2 5.3e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01245 K09286 - qsa:O6P43_019667 434.106