Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01242 ATGACTAATCAAAATGTATTGGTTCCTGACGTCAAGTCACGTATTGGTGTGGCTATTGCTGTTGCTATGTCGAATTCGGGTTTGCTTTCTGGACCTGCGGTGCCGGAATCATGGGCTGCACTAGGTGGCTTTCTGGCAATATCTCAAAAGAAACTTATCAATAGACTTGAATATGGTGGAGGAGGAGGAGGAGCCAAAGTTAGTGCTTGGATTGATTCCATGAGAGCTTCCTCTCCACCCCGAACCCAATCCACCATTCGTACTCCTGTCACGAATGAGAGCCATTCTTGGATTTTTGATCATCCTCCCGCTTTGAGCAAGTTTGATGAGATAAAAAAGGAGATGAAAGGAAAACGGGTTGTAATGTTTTTGGATTATGATGGAACTCTCTCCCCTATCGTCTCGGATCCCGACAGAGCATTCATGACAAAAAAGATGAGAGCAGCTGTAAAGGACGTAGCTAGGCATTTCCCCACAGCTATAGTGAGTGGGAGATGCAAGGACAAGGTGTTCAACTTCGTAAAATTGGCAGAGCTCTACTATGCTGGTAGCCATGGAATGGACATCCAAGGACCAACCACGAATGAGCATCATCACAAGAAAGTTAATCAACGTGTCCTCTTTCAACCAGCTGATGAATTCTTGCCGATAATAGATGAGGTCTATAAAGTCTTGTTTGAGAAAACAAAATCTGTGCCGGGAGCTTACGTAGAGAATAACAAGTATTGCTTATCAGTGCATTTTCGTTGTGTGGATGAAAAGAGTTGGGCATCATTGGCTGAGCAAGTTAGATCAGTACTCAACGATTATCCCAAACTTAGGTTGACCCAAGGGAGAAAGGTACTTGAGATTCGTCCAACCATCAAATGGGACAAAGGAAAAGCTCTTGAATTCCTGTTGGAGTCTTTAGGTTATGCAAACTCCAATGATGTGTTTCCTATTTACATTGGTGATGATCAAACGGATGAAGATGCATTTAAGGTTTTGAGCAATAGAGGGCAAGGGATTGGTATCCTTGTTTCCAAAATCCCAAAAGAAACCAAGGCTTCTTACACTCTACAGGACCCATCCGAGGCAAGTAGTTCAAAACACAAATTAAACTTGCCATTTCCAAAGTTGGAAAATAATTAA 1131 0.4262 MTNQNVLVPDVKSRIGVAIAVAMSNSGLLSGPAVPESWAALGGFLAISQKKLINRLEYGGGGGGAKVSAWIDSMRASSPPRTQSTIRTPVTNESHSWIFDHPPALSKFDEIKKEMKGKRVVMFLDYDGTLSPIVSDPDRAFMTKKMRAAVKDVARHFPTAIVSGRCKDKVFNFVKLAELYYAGSHGMDIQGPTTNEHHHKKVNQRVLFQPADEFLPIIDEVYKVLFEKTKSVPGAYVENNKYCLSVHFRCVDEKSWASLAEQVRSVLNDYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYANSNDVFPIYIGDDQTDEDAFKVLSNRGQGIGILVSKIPKETKASYTLQDPSEASSSKHKLNLPFPKLENN* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01242 376 MobiDBLite consensus disorder prediction 351 376 - -
Pte8g01242 376 FunFam Trehalose 6-phosphate phosphatase 211 287 - -
Pte8g01242 376 FunFam Trehalose 6-phosphate phosphatase 217 368 - -
Pte8g01242 376 NCBIfam HAD-IIB family hydrolase 122 330 IPR006379 -
Pte8g01242 376 CDD HAD_TPP 121 358 - -
Pte8g01242 376 NCBIfam trehalose-phosphatase 117 359 IPR003337 GO:0003824|GO:0005992
Pte8g01242 376 Gene3D - 211 287 - -
Pte8g01242 376 FunFam Trehalose 6-phosphate phosphatase 120 206 - -
Pte8g01242 376 Pfam Trehalose-phosphatase 123 357 IPR003337 GO:0003824|GO:0005992
Pte8g01242 376 Gene3D - 122 353 IPR023214 -
Pte8g01242 376 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 45 366 IPR044651 GO:0004805|GO:0005992
Pte8g01242 376 SUPERFAMILY HAD-like 121 359 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01242 Pte-Chr8 36364917 36367705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01242 116 359 Trehalose Biosynthesis Gene Families AT1G70290 26.538 1.22e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01242 K01087 - qsa:O6P43_015290 549.28