Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01209 ATGGCAGTTGTTCCCTCTCCACGCGAAGAGAATGTGTACATGGCGAAGCTTGCAGAGCAAGCGGAGCGTTACGAGGAAATGGTCGAGTTCATGGAGAAGGTTTCGGCAGCCGTTGAAAACGAGGAACTCTCTGTGGAGGAGAGGAACCTCCTCTCCGTCGCGTACAAGAACGTTATCGGTGCTAGACGTGCCTCCTGGCGTATCATCTCCTCCATCGAACAGAAGGAGGAGAGTCGGGGCAACGAGGACCATGTAGCCATGATCCGTGACTACCGATCTAAGATTGAGACCGAACTGTCTCAAATCTGCGACGGGATCCTCAAGCTTCTTGACTCCCGGCTCATCCCTTCCGCCACTTCTGGTGATTCCAAGGTCTTCTACCTTAAGATGAAGGGTGATTACCATAGGTACCTCGCTGAGTTCAAGACCGGTGCCGATCGTAAGGAGGCCGCTGAGAGCACTCTAACAGCTTACAAATCTGCTCAGGACATTGCCAATGCAGAATTGCCTCCAACACATCCAATCAGGCTAGGTCTTGCCCTCAACTTCTCTGTGTTTTACTATGAGATCCTCAACTCTCCGGATCGTGCTTGCAGCCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAGTTGGATACATTGGGAGAGGAGTCATACAAGGACAGCACTTTGATCATGCAACTTCTCCGAGATAACCTCACCCTCTGGACTTCTGACATGCAGGATGATGGGGCAGATGAAATCAAAGAAGCACCCAAGCCTGCTGATGAACCGCAGCAGTGA 786 0.5115 MAVVPSPREENVYMAKLAEQAERYEEMVEFMEKVSAAVENEELSVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAMIRDYRSKIETELSQICDGILKLLDSRLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGADRKEAAESTLTAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACSLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAPKPADEPQQ* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Pte8g01209 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Pte8g01209 261 FunFam 14-3-3 protein epsilon 4 251 - -
Pte8g01209 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Pte8g01209 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Pte8g01209 261 Coils Coil 14 41 - -
Pte8g01209 261 MobiDBLite consensus disorder prediction 243 261 - -
Pte8g01209 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Pte8g01209 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Pte8g01209 261 PIRSF 14-3-3 3 250 IPR000308 -
Pte8g01209 261 SMART 1433_4 8 251 IPR023410 -
Pte8g01209 261 Gene3D - 3 251 IPR036815 -
Pte8g01209 261 PANTHER 14-3-3 PROTEIN 8 242 IPR000308 -
Pte8g01209 261 MobiDBLite consensus disorder prediction 241 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01209 Pte-Chr8 36098390 36100297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01209 4 260 14-3-3 family AT1G78300 89.189 9.02e-171 470
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01209 K06630 - qsa:O6P43_015326 486.493