Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01199 ATGGCACTTGAAGCTATAGTGTTCCCCCAAGATCCCTTCAACTATGGCTGCAAAGATTTTTACTCCTTAGTAGAGGCAATAGGAGGAGAAGGAGGAGGAGAAAGTTCCGTTGGAACTTGGGGCCATGAAAATTTGCAAGATGAAGAGAAAGGCCTGATGGGAGTTTTTGATAGAAATAAGCACATACAGAACGGTGCAAATCTGCACGTGAACTGGGACTGCTCTTCGTCTTCAGTACTTCAAAATGTGAAGGATCAATGCCACCGGGAGACTAATTCGTCCCCTGAAGCCTGCACAGTCACTCAGCCTTCGCTCACGCCGGAATTCCCTCTAGTAACGGAAACCGTTCTGCCGTCAACCGGCAGGCGCAAACGTCGAAGAACTAGGAGCACAAAGAATACGGAGGAAATTGAGAACCAGAGATTGACTCACATTGCCGTTGAGCGCAACCGGAGAAAACAGATGAATGAATACCTAGCTATTCTTCGATCTCTGATGCCACCTTCATACGTTCGAAGGGGTGACCAAGCATCCATCATTGGAGGTGCAATCAGCTTTGTGAAGGAGCTAGAGCAGCTGCTGCAGTCTATGGAAGGCCATAGAAAATCAAAGCAACAGCCCAAAGAGAATGGCTCTTCTTCCCCACCATTTGCTGAGTTCTTCAGCTTTCCCCAGTACTCAACTCGCGCCGCCAGTCACGATGATAGTACTACTTCTCAAGCCAACGCGGACGCCGCAGAAAAGGAGCCAATGAATCAGAACCAGAACCAGTGGGCGGTGGCTGACATAGAAGTGAGCATGGTACATAGCCATGCCAACCTCAAGATACTTTCAAAGAAAAGACCCAGGCAGCTACTGAAGATGGTTGTTGGGTTCCAAAGCTTGAGACTCAATATTCTACACCTAAATGCTACAATTGCTGAAGAAATGGTACTTTACTCAGTTAGTGTAAAGCTTGAAGAAGGGTGTCATCTCAACACAGTGGACGACATAGCTGCGGCTGTGAATCAACTATTGATCAGAATAATTCAAGAGGAAGCTGCTTCCAGCTGA 1053 0.4729 MALEAIVFPQDPFNYGCKDFYSLVEAIGGEGGGESSVGTWGHENLQDEEKGLMGVFDRNKHIQNGANLHVNWDCSSSSVLQNVKDQCHRETNSSPEACTVTQPSLTPEFPLVTETVLPSTGRRKRRRTRSTKNTEEIENQRLTHIAVERNRRKQMNEYLAILRSLMPPSYVRRGDQASIIGGAISFVKELEQLLQSMEGHRKSKQQPKENGSSSPPFAEFFSFPQYSTRAASHDDSTTSQANADAAEKEPMNQNQNQWAVADIEVSMVHSHANLKILSKKRPRQLLKMVVGFQSLRLNILHLNATIAEEMVLYSVSVKLEEGCHLNTVDDIAAAVNQLLIRIIQEEAASS* 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01199 350 SMART finulus 145 196 IPR011598 GO:0046983
Pte8g01199 350 MobiDBLite consensus disorder prediction 229 253 - -
Pte8g01199 350 MobiDBLite consensus disorder prediction 198 217 - -
Pte8g01199 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 190 IPR011598 GO:0046983
Pte8g01199 350 PANTHER MAX DIMERIZATION, MAD 112 347 - -
Pte8g01199 350 Gene3D - 134 204 IPR036638 GO:0046983
Pte8g01199 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 139 205 IPR036638 GO:0046983
Pte8g01199 350 CDD bHLH_AtFAMA_like 142 215 - -
Pte8g01199 350 MobiDBLite consensus disorder prediction 117 138 - -
Pte8g01199 350 Pfam Helix-loop-helix DNA-binding domain 140 191 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01199 Pte-Chr8 36032206 36034696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01199 1 319 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 46.707 9.80e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte8g01199 HLH 1.6e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01199 - - qsa:O6P43_015344 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01199 8 36032206 36034696 Pte8g01199 8 36032206 36034696 RCT