Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01190 ATGATAGAAAGTTCTTGTTTATCCCGTTCGCCCTCATTTCAGTTGTATTTAAAGGGATATGTGGAGAAGATTGCTCGTGATCAGCATGGGTGCATGGTGTTAGTTGGCATTGTTTCAGTTGTGGGACTCTTTGCTATCAGAGTTACTGATGACGAAACTGATAAAAAGGTTACAGAAGTTGAAGGGGTTGATCGTGGAGCCAATGACGAAGAAGATATTGACTATGAGTTCTTCAACGATGATGGGTATGAAAACATTAGCAGTGCATATGATTGTGTCTTGCACTTGAATGAAGAAGATTGTGATGATAACTCCTCTGAAGCTAGCTTGGGTGACTCTTGCTGCAGCCAAAAATCGTGGAGGGGAGAGAAAGAAGGATCTGCCAGTCGAGACTACTATAAAATTCTTGGTGTCCCTGAGAATGCTAGTCAGGATGATATTAAGAAGGCATTTTACGTTCTTGCTGAAAAGAACCATCCAGATGCGAATAAGAATAATCTATCTGCAAAAAGAAAATTCCAAGATATAAGACAAGCTTATGAGATCTTACGAGATTCTGACAAGAGGGCACAATATGACAGGGTTGCTGAGGATCCTCTTTTCACTAGAGATGGTGCTGATATCTATGTGGAGTCTAATATTAGCTTTACACAAGGACGGCTGATAGCAAATTCCTCTGATATTATACATCTTGACTTCACCGATCAGCTGAACTTGTGGAAGCATCAGTTATATGTTTTTGGAGTTTAG 750 0.4013 MIESSCLSRSPSFQLYLKGYVEKIARDQHGCMVLVGIVSVVGLFAIRVTDDETDKKVTEVEGVDRGANDEEDIDYEFFNDDGYENISSAYDCVLHLNEEDCDDNSSEASLGDSCCSQKSWRGEKEGSASRDYYKILGVPENASQDDIKKAFYVLAEKNHPDANKNNLSAKRKFQDIRQAYEILRDSDKRAQYDRVAEDPLFTRDGADIYVESNISFTQGRLIANSSDIIHLDFTDQLNLWKHQLYVFGV* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01190 249 SUPERFAMILY Chaperone J-domain 128 217 IPR036869 -
Pte8g01190 249 CDD DnaJ 131 185 IPR001623 -
Pte8g01190 249 PANTHER DNAJ HOMOLOG SUBFAMILY A MEMBER 3, MITOCHONDRIAL 121 196 - -
Pte8g01190 249 ProSitePatterns Nt-dnaJ domain signature. 173 192 IPR018253 -
Pte8g01190 249 SMART dnaj_3 130 188 IPR001623 -
Pte8g01190 249 PRINTS DnaJ domain signature 188 207 IPR001623 -
Pte8g01190 249 PRINTS DnaJ domain signature 168 188 IPR001623 -
Pte8g01190 249 PRINTS DnaJ domain signature 133 151 IPR001623 -
Pte8g01190 249 PRINTS DnaJ domain signature 151 166 IPR001623 -
Pte8g01190 249 Pfam DnaJ domain 131 193 IPR001623 -
Pte8g01190 249 Gene3D DnaJ domain 115 209 IPR036869 -
Pte8g01190 249 ProSiteProfiles dnaJ domain profile. 131 196 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01190 Pte-Chr8 35979561 35983634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01190 127 202 C2H2 Transcription Factor Family AT1G74250 34.568 2.32e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01190 - - qsa:O6P43_006211 119.398