Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01187 ATGAGGAAGAAAAGGAAAGGAAGTGAAAATGATGAATGCGCTTGTGTACCGGATATTTTGACACCCACGCATGGTTCCTTATCATTCAACCTTAGATCTCACTATTCACTCGAGGATTATGCTCGATTGAAGAAGAGGTGTAAAGAACATACTGAAGCTGAGGCTGTTGTTTCCCACATAAGTAGAATTGCGGGGATTGCAACAGCACCACCATGTGGAACTTCATCTCTGCTAACTCCTGGACGAGGTGTCAAGAGGAAGATTGGCTGTATAAATGTTGCTACTCAAATGGGTAGAAAGAAAAAAATTGAAGATGATTATACAGCTGGAGACACGATCGGGCAAGGTAAATTTGGGTCTGTCTGGTTGTGTAGGTCCAAGGTTAGTGGAGCAGAATATGCATGCAAGACACTTCGGAAAGGAGAGGAGACAATTCATAGAGAAGTGGAGATAATGCAGCATTTATCTGGACACCCAGGGGTGGTAACACTGCAGGCAGTTTATGAAGAATCAGATTGCTTTCATCTTGTCATGGAACTGTGCTCTGGTGGGCGATTGATTGATCAGATGGTTAAGGAGGGCCGATATTCAGAACAGCGTGCTGCCAATATATTCAAGGAAATAATGTTACTTATCAAGTATTGTCACGATATGGGTGTTGTACACAGAGATATCAAGCCTGAGAATATTCTCATTTCATCCTTAGGAAAGATAAAACTTGCCGATTTTGGTCTGGCTATGAGAATTTCTGATGGTCAGCATTTGACTGGTTTAGCGGGAAGCCCAGCATATGTTGCCCCAGAAGTATTGTCTGGTAAATATTCAGAGAAGGTGGATATATGGAGTGCTGGAGTCCTTTTACATGCACTCTTGGTCGGTTCTCTTCCATTCCAAGGAGATTCCTTGGAAGCAGTTTTTGAGGCTATCAAGAATGTGAAACTTGATTTCCAGACTGGGATATGGGACTCAATATCTAAACCTGCCCGAGACCTTGTGTCGAGGATGCTAACAAGGGATTTTTCTGCTAGAATAACTACTGAGGAAGTATTTAGGCATCCGTGGATATTATTCTACACACAGGATACATTAACGAAGCTGCCAATCATATCCAGATATAAGTATCAAGGATTAACTTGCAGCCAACGTCGTGTTTCACATGGACCAAGGTTTGGTGGGGAAATAGACAATGGTTCCCCTGGTGAGCATCCGAGTCCACTATCTTCATTTGGAAGTGGGAAGTCAGAGGAACAGGATGAATGTGTTCTGGTAGACGCACTTGCCACCGCAATATCGCATGTGCGGATATCGGAGCCGAAGAGGAGCAGGTTGTGTGTTCCAGGCCCCATAGAGCCACAGGGTTCTTCTAACTTGAAGGCTAGCAATCTCTGTAAAGCATTTTAA 1401 0.4361 MRKKRKGSENDECACVPDILTPTHGSLSFNLRSHYSLEDYARLKKRCKEHTEAEAVVSHISRIAGIATAPPCGTSSLLTPGRGVKRKIGCINVATQMGRKKKIEDDYTAGDTIGQGKFGSVWLCRSKVSGAEYACKTLRKGEETIHREVEIMQHLSGHPGVVTLQAVYEESDCFHLVMELCSGGRLIDQMVKEGRYSEQRAANIFKEIMLLIKYCHDMGVVHRDIKPENILISSLGKIKLADFGLAMRISDGQHLTGLAGSPAYVAPEVLSGKYSEKVDIWSAGVLLHALLVGSLPFQGDSLEAVFEAIKNVKLDFQTGIWDSISKPARDLVSRMLTRDFSARITTEEVFRHPWILFYTQDTLTKLPIISRYKYQGLTCSQRRVSHGPRFGGEIDNGSPGEHPSPLSSFGSGKSEEQDECVLVDALATAISHVRISEPKRSRLCVPGPIEPQGSSNLKASNLCKAF* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01187 466 SUPERFAMILY Protein kinase-like (PK-like) 97 377 IPR011009 -
Pte8g01187 466 PANTHER SERINE/THREONINE-PROTEIN KINASE 93 362 - -
Pte8g01187 466 CDD STKc_CAMK 106 354 - -
Pte8g01187 466 SMART serkin_6 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01187 466 Pfam Protein kinase domain 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01187 466 ProSiteProfiles Protein kinase domain profile. 107 355 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01187 466 MobiDBLite consensus disorder prediction 388 413 - -
Pte8g01187 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Pte8g01187 466 Gene3D Transferase(Phosphotransferase) domain 1 98 384 - -
Pte8g01187 466 FunFam Serine/threonine-protein kinase PEPKR2 98 422 - -
Pte8g01187 466 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Pte8g01187 466 FunFam Aurora kinase A 99 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01187 Pte-Chr8 35963229 35966395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01187 91 354 EF-hand Containing Proteins AT2G38910 43.273 1.11e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pte8g01187 Pkinase 2.7e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01187 - - qsa:O6P43_015356 736.487