Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01182 ATGGAATTTGACGAGCACCAAGGCCAAGAGGATGGAGATGAAGTGGAAGAGGAAGATGAAGAAGACATGGGAGTTCCAGTGCCTCCGCTGGTTTTCGAATCTCTAAGCAACTCCAAGATGGGCCAATCTGCTGAAGAAGGTGGTGGGGTTTCTTCAACAATCGCAGCCAGGAAAGGAAGCAGCTCAGTCAGGTATAGAGAGTGTCTCAAAAACCATGCCGTCAGCATCGGTGGCCACGCCGTGGACGGTTGCCGTGAGTTCATGGCTGCTGGTCAGGAAGGAAAGCTGGAAGCTTTAAAATGTGCAGCCTGCAACTGTCACCGGAATTTCCACCGGAAAGAAACTGATGCAGAATCGAAGACGCCGGTTTCACAATACCAACATCGCCACCAGCAACATTATCATCTTCAGCAAGTGTCACCTTATTATCGGACTCCAGCACCTGCAAGCGGCGGGTACCTTCCGCAACCTTACCCGCACCAACGCCATCATCCCTTGTCTTCTCACCAGGTACCCCACCATCGTCCGCTGGCCCTGCCAGCTTCTGCAGCATCTGGAGGAGAACAAAGTAGGGAAGAGGAGGACATGTCAAACCCAAGTAGCAGTGGCGGTGGCCGAACTGGGAGTGGGACGAAGACTAAGAGGTTTAGGACAAAGTTTACGCAGGAACAGAAGGAGAAGATGCTGGCATTTTCGGAGAGACTTGGGTGGAGGATGCAGAAGCATGATGATGCAACGGTGGAGCAGTTCTGTGCAGAGATTGGTGTCAAGAGACAAGTACTCAAGGAGTTGATGCATGTCAAAGCCAGGGATGAACATAAAGAAGCTAGGTCACAGATGGATAAGGGTGTAAATGACAAATGTACCACTGTAAAACCTTGA 882 0.5091 MEFDEHQGQEDGDEVEEEDEEDMGVPVPPLVFESLSNSKMGQSAEEGGGVSSTIAARKGSSSVRYRECLKNHAVSIGGHAVDGCREFMAAGQEGKLEALKCAACNCHRNFHRKETDAESKTPVSQYQHRHQQHYHLQQVSPYYRTPAPASGGYLPQPYPHQRHHPLSSHQVPHHRPLALPASAASGGEQSREEEDMSNPSSSGGGRTGSGTKTKRFRTKFTQEQKEKMLAFSERLGWRMQKHDDATVEQFCAEIGVKRQVLKELMHVKARDEHKEARSQMDKGVNDKCTTVKP* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01182 293 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 48 267 - -
Pte8g01182 293 MobiDBLite consensus disorder prediction 35 55 - -
Pte8g01182 293 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 65 114 IPR006456 -
Pte8g01182 293 MobiDBLite consensus disorder prediction 114 217 - -
Pte8g01182 293 Gene3D - 197 274 - -
Pte8g01182 293 MobiDBLite consensus disorder prediction 1 24 - -
Pte8g01182 293 MobiDBLite consensus disorder prediction 120 139 - -
Pte8g01182 293 Pfam ZF-HD protein dimerisation region 63 115 IPR006456 -
Pte8g01182 293 MobiDBLite consensus disorder prediction 196 215 - -
Pte8g01182 293 NCBIfam homeobox domain, ZF-HD class 214 266 IPR006455 -
Pte8g01182 293 MobiDBLite consensus disorder prediction 270 293 - -
Pte8g01182 293 MobiDBLite consensus disorder prediction 1 55 - -
Pte8g01182 293 NCBIfam ZF-HD homeobox protein Cys/His-rich dimerization domain 64 114 IPR006456 -
Pte8g01182 293 SUPERFAMILY Homeodomain-like 200 263 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01182 Pte-Chr8 35937076 35938098 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01182 14 266 ZF-HD Transcription Factor Family AT4G24660 52.174 9.34e-68 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Pte8g01182 ZF-HD_dimer 2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01182 - - pcin:129294191 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01182 8 35937076 35938098 Pte8g01182 8 35937076 35938098 RCT