Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01179 ATGGGAGAAGATTGTGGAACTTGGGCTCCCCAGTTTCACCTTGATTGGCAATCACCTAAGTTGATTCCTTTTGATAGGCCACAGGATGTGGGGAAGGTGACTTGCATTCCTACATTTGCGAACTCTGGCATTAATATGACCGGTAATGGTGCATTGTCTGTTTATGGACCCTCAGAACTACCGAGTTTGAACTTAGGCCAGTCAAATTCAACTCAAGGTTGGTTCTCTTGCTCACCTGACTTTCGTGATGCATTGCTCCCTGATGAGAATACTACTGAAACACTCATACAGCCTGATAAAAATGCTGAGAATATCTCACCCATTGTCGCCTCTATTGGTCAGAAGAGGCAATTCATCGTTGTTGATCAGTCCGGTGATCAGACAACTTTCTTTTTTAGTTCTGGATTTGGAAGTCCCATCCAGTGCCACACTTCTTCCAGTCCAAAATTTGAAAGCAATCACAACATGCTTGGAAATATGCTTTTAGGTCAAGGAGATTCCATCAATGTCAAAGGGTTACCTTTCATGAATGAATTTGATGGAAATCAGGAGAATGATGTTGAGAGTGAGATGCCTGATGACTCGAAAGACATTGATGCCATGTTTTTCTCTGATGAAGATGCATACTCGACAGAGGATGATGAAGTCACCAGCACTGGTCATTCACCCAGTACAATGACCAAACATTATGATGTGCAGGAAATTGTTTGGACTAATACGGAAGAGGTTGCTAGTTCTTTGGTCAAATCAAAAAAACGAAAACTACATGAAGATTTTGATCACGATACACAGCTCTTGGACACTGCTAGTTCTTTAAATGTTAACAGTTTTGGTATCAAGTATGAAGCCGGTGAATCAAGATGCGCTTGTGGTAGCAATCGTCAAATGTCAAGAGAAATTGGTTCCTGTTCTGGCAGCAAGAGGATGAGGAAAGAGAGAATCATTGATGTTCTCAGTGCTCTGCAGAACATGATCCCTGGTGGGAAAGACAAAGATCCCATCATGCTTCTTGATGAGGCCATAAGTCGCTTGAAATCTTTGAAACTTAAAGCTAAGCTCTTGGGACTGGACGCTTTGTAA 1080 0.4204 MGEDCGTWAPQFHLDWQSPKLIPFDRPQDVGKVTCIPTFANSGINMTGNGALSVYGPSELPSLNLGQSNSTQGWFSCSPDFRDALLPDENTTETLIQPDKNAENISPIVASIGQKRQFIVVDQSGDQTTFFFSSGFGSPIQCHTSSSPKFESNHNMLGNMLLGQGDSINVKGLPFMNEFDGNQENDVESEMPDDSKDIDAMFFSDEDAYSTEDDEVTSTGHSPSTMTKHYDVQEIVWTNTEEVASSLVKSKKRKLHEDFDHDTQLLDTASSLNVNSFGIKYEAGESRCACGSNRQMSREIGSCSGSKRMRKERIIDVLSALQNMIPGGKDKDPIMLLDEAISRLKSLKLKAKLLGLDAL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01179 359 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 298 347 IPR011598 GO:0046983
Pte8g01179 359 PANTHER TRANSCRIPTION FACTOR BHLH145 8 357 IPR037546 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01179 Pte-Chr8 35891136 35894953 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01179 73 352 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 28.826 2.63e-20 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01179 - - qsa:O6P43_015366 293.893