Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01175 ATGGCACCCAGTTTTGACTGTGCAGATTCAAGCCTCCTATGTGCAGAAGACAAAAGCATTTTCGATGATAACGATTGTGTGGGGCTGGTGGAGGACTCGGAGACTCCATGGTATCATAGGTATGATGGAATCCGTGAGGTAGCCTATGGGTTTGGTGGTGGAGATAGGTTACAGATACAGAGTGAAGAATGCTTGATGCTTCTGTTGGAGAAAGAATGCCAGCATCTGCCTCAAGTTAATTACTTGAATAGGCTAAGGAGTGGGGATTTGGACATTGGGGCCAGAAAAGAGGCCGTTGATTGGATTGAAAAGGTTCGGCTGCATTTTGGCTTTGGACCTCTTTGTGCATATTTGTCTATAAACTACTTGGATCGGTTCCTTTCAGCATATGAATTACCTAAGGGGAAGGCTTGGACAATGCAGTTACTAGCTGTGGCATGTCTATCACTTGCAGCCAAAGTAGAGGAGACAGAAGTGCCTGTGTCTCTCGATTTGCAGTTGAGCGAATCAAAGTTTCTATTTGAAGCTAGAACAATTCAAAGAATGGAGCTTCTGGTGCTAAGCACATTGAAGTGGAGAATGCATGCAATCACTCCTTTCTCCTTTATTGACTATTTCCTTTGCAAGATCAATAATGATAATCATCCTCTTAAAATCTCTATTTCGCAAGCAATTCAAGTGATATTGAGCACAACTAAAGGTACTGGCTTCTTGGAATTTAGGCCTTCAGAAATTGCAGCAGCAGTTGCTATATATGTGGCTGGGGAAACCCAAAAGGTTGACAGTGAGCAAGCAATACTTATTCTCATTCAACTTATTGAAAAGGATAGGGTTCTGGAGTGTATTAAAAGGATTCATAATTTGTCATCAAACAGAAAGGATCAATCGAGTGATTCTGTCTCATCTGTGCCCCAAAGTCCAATTGGAGTACTTGATGCGTGCTTCAGCTATAAAACCGACGACTCTCTGCCTGGCTCATGTGCAAATTCTTCACACAGTAGTCCAGATGCTAAAAGGAGGAAGCTCAACAAAACCTGTGGATTGGAGTCATTATAG 1056 0.4242 MAPSFDCADSSLLCAEDKSIFDDNDCVGLVEDSETPWYHRYDGIREVAYGFGGGDRLQIQSEECLMLLLEKECQHLPQVNYLNRLRSGDLDIGARKEAVDWIEKVRLHFGFGPLCAYLSINYLDRFLSAYELPKGKAWTMQLLAVACLSLAAKVEETEVPVSLDLQLSESKFLFEARTIQRMELLVLSTLKWRMHAITPFSFIDYFLCKINNDNHPLKISISQAIQVILSTTKGTGFLEFRPSEIAAAVAIYVAGETQKVDSEQAILILIQLIEKDRVLECIKRIHNLSSNRKDQSSDSVSSVPQSPIGVLDACFSYKTDDSLPGSCANSSHSSPDAKRRKLNKTCGLESL* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01175 351 Pfam Cyclin, C-terminal domain 197 300 IPR004367 -
Pte8g01175 351 FunFam D6-type cyclin 191 283 - -
Pte8g01175 351 Gene3D - 68 285 - -
Pte8g01175 351 CDD CYCLIN_AtCycD-like_rpt2 197 285 - -
Pte8g01175 351 CDD CYCLIN_AtCycD-like_rpt1 94 192 - -
Pte8g01175 351 MobiDBLite consensus disorder prediction 326 351 - -
Pte8g01175 351 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Pte8g01175 351 SMART cyclin_7 100 188 IPR013763 -
Pte8g01175 351 MobiDBLite consensus disorder prediction 334 351 - -
Pte8g01175 351 PANTHER CYCLINS 62 293 IPR039361 -
Pte8g01175 351 FunFam D2/4-type cyclin 78 190 - -
Pte8g01175 351 SUPERFAMILY Cyclin-like 60 195 IPR036915 -
Pte8g01175 351 SMART Cyclin_C_2 197 306 IPR004367 -
Pte8g01175 351 SUPERFAMILY Cyclin-like 179 306 IPR036915 -
Pte8g01175 351 ProSitePatterns Cyclins signature. 95 126 IPR006671 -
Pte8g01175 351 Gene3D - 78 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01175 Pte-Chr8 35854420 35857109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01175 11 260 Core Cell Cycle Gene Families AT5G65420 55.159 2.50e-82 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01175 K18810 - qsa:O6P43_015367 490.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01175 8 35854420 35857109 Pte8g01175 8 35854420 35857109 RCT