Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01163 ATGAACGGTGGTATGTCAAACTTGACCGCGTCATCATCGGTGGAGACAAAACCTACTGAAACGTTAACAAGCAAGAGTCACAAGGAAGCTGAGAGGAGACGGCGCCAAAGAATCAATGCCCATCTCTCCACTCTCCGTTCTATTCTGCCTAAAGCAGCCAAGGCAGACAAGGCGTCCTTGCTTGCGGAAGTGGTCCAACACGTTAGAGAGCTGAGGAGACAGGTTGCTGAGGTGGCGCAACTTCAGGACTGGGATGTGAGCAGCAGCGCCGCCACAACTAGCAGGTGTGGATCGGGTCATGCAGAGACGGATGGGTGGCCTTTCCCTGGTGAATCGGACGAGGTGACTTTGAGTCGCTACGAAGACGGGGGAGTGAAGTTGTTAAAAGCAACGGTTTGCTGTGAGGACCGAGATAATCTGAACCGAGAGCTAAGCCGGGCGATTCAGTCGGTTCGGGCTAAGGTAGTGAAAGTCAAGATGGTTACAATTGGTGGGCGGACCAAAAATGTGGTGGTCTTGCAATGGCCCAAAAATTGTGAAGAAGAAGTAGGAGCATTGAAGAGGGCTTTGAATGCAGTGATCGACAGTCGGGCGTTTGCGACTAGTGTGGGCCAGGTTATTAGAGGTAACAAACGGGTCAGGGATCCGTACGGCTTGGTCAATAAGATTGATGATGATGACGACGACGGTTAA 693 0.5166 MNGGMSNLTASSSVETKPTETLTSKSHKEAERRRRQRINAHLSTLRSILPKAAKADKASLLAEVVQHVRELRRQVAEVAQLQDWDVSSSAATTSRCGSGHAETDGWPFPGESDEVTLSRYEDGGVKLLKATVCCEDRDNLNRELSRAIQSVRAKVVKVKMVTIGGRTKNVVVLQWPKNCEEEVGALKRALNAVIDSRAFATSVGQVIRGNKRVRDPYGLVNKIDDDDDDG* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01163 230 PANTHER TRANSCRIPTION FACTOR BHLH30 11 214 IPR045847 GO:0003700|GO:0006355
Pte8g01163 230 MobiDBLite consensus disorder prediction 1 20 - -
Pte8g01163 230 MobiDBLite consensus disorder prediction 1 33 - -
Pte8g01163 230 Pfam Helix-loop-helix DNA-binding domain 25 71 IPR011598 GO:0046983
Pte8g01163 230 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 26 83 IPR036638 GO:0046983
Pte8g01163 230 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 22 71 IPR011598 GO:0046983
Pte8g01163 230 Gene3D - 19 81 IPR036638 GO:0046983
Pte8g01163 230 SMART finulus 28 77 IPR011598 GO:0046983
Pte8g01163 230 MobiDBLite consensus disorder prediction 90 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01163 Pte-Chr8 35733335 35734291 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01163 24 192 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G25710 39.766 7.09e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte8g01163 HLH 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01163 - - qsa:O6P43_015382 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01163 8 35733335 35734291 Pte8g01163 8 35733335 35734291 RCT