Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01150 ATGAATTCGCAGCCACAGCCTCTACAAGCGCGTCCACTGTTGGACCCTGTGACTTTGAGTGGTTCCATAGCGATTGATGACGATGATGGTGAATATGAAGATATTGGTATTGGTGAATACGCCATGGATGAAGTGGAAGAAACTAATGTTAATATTATGAGTAATTCAGTGAGCGTTGCTAATCATGGAGGTATTATGGCGTCTCGTGCGAGTGAGCTCACTCTTTCGTTTGAGGGCGAGGTTTACGTGTTTCCGGCTGTTACACCCGAAAAGGTCCAAGCAGTGCTGTTACTTCTAGGGGGACGCCATGTGCCAACCGGGGTACCAACGGTTGAAATTCCATTTGAGCAAAACAACAGGAGTGACACCCCAAAGCACTCAAATCTGTCCCGAAGAATAGCCTCCTTGGTAAGATTTCGTGAAAAACGAAAGGAAAGGTGTTTTGACAAGAAGATTAGGTATACTGTCAGGAAAGAGGTTGCACAGAGGATGCATCGCAAGAATGGGCAGTTTGCATCCTTAAAAGAAAGTCCAGGTGCTTCATCGTGGGATTCTATGCAGAGTTGCCATCAAGATGGCTCCAGTCATCCTGAAGTTGCGCGTAAATGCCAACATTGTGGCGTCAGTGAAAGTAATACTCCTGCAATGCGTCGTGGGCCAGCTGGACCGAGGACTCTGTGTAATGCTTGTGGTCTTATGTGGGCAAATAAGGGTACCCTGAGGGATCTCAAGAAGGGAGGAAGAAATCTTTCTATAGACCAGTCTGAAAGTGAGACTCTCGTAGATGTCAAGCCTCCAAGGGTGGAACGAGAATTGGCTCGCATCCCAGATGAGCAGGTATTAACTTTTAATATGCAGTGTCGTAGTTTTCCGTTTGGAAGACTGAACAATTATATCCGTGTACAACTTTCTGTATATCAGAGGATTTCTGAAGGCTCTCATAAGGCTGCAACTGACGGATCTAATAATCCGTGTGTAAATCGGGATGAAGATGTAAGTTCTGCATTGACATTAAAATTCTAG 1023 0.4536 MNSQPQPLQARPLLDPVTLSGSIAIDDDDGEYEDIGIGEYAMDEVEETNVNIMSNSVSVANHGGIMASRASELTLSFEGEVYVFPAVTPEKVQAVLLLLGGRHVPTGVPTVEIPFEQNNRSDTPKHSNLSRRIASLVRFREKRKERCFDKKIRYTVRKEVAQRMHRKNGQFASLKESPGASSWDSMQSCHQDGSSHPEVARKCQHCGVSESNTPAMRRGPAGPRTLCNACGLMWANKGTLRDLKKGGRNLSIDQSESETLVDVKPPRVERELARIPDEQVLTFNMQCRSFPFGRLNNYIRVQLSVYQRISEGSHKAATDGSNNPCVNRDEDVSSALTLKF* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01150 340 Gene3D - 195 255 IPR013088 GO:0006355|GO:0008270
Pte8g01150 340 ProSiteProfiles CCT domain profile. 132 174 IPR010402 GO:0005515
Pte8g01150 340 ProSitePatterns GATA-type zinc finger domain. 203 230 IPR000679 GO:0006355|GO:0043565
Pte8g01150 340 Pfam GATA zinc finger 203 239 IPR000679 GO:0006355|GO:0043565
Pte8g01150 340 PANTHER GATA TRANSCRIPTION FACTOR 28 27 306 IPR045280 GO:0006355
Pte8g01150 340 SMART tify_2 66 101 IPR010399 -
Pte8g01150 340 ProSiteProfiles Tify domain profile. 66 101 IPR010399 -
Pte8g01150 340 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 200 246 - -
Pte8g01150 340 MobiDBLite consensus disorder prediction 174 194 - -
Pte8g01150 340 Pfam tify domain 69 100 IPR010399 -
Pte8g01150 340 ProSiteProfiles GATA-type zinc finger domain profile. 197 243 IPR000679 GO:0006355|GO:0043565
Pte8g01150 340 Pfam CCT motif 132 173 IPR010402 GO:0005515
Pte8g01150 340 CDD ZnF_GATA 202 246 IPR000679 GO:0006355|GO:0043565
Pte8g01150 340 MobiDBLite consensus disorder prediction 172 196 - -
Pte8g01150 340 SMART GATA_3 197 250 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01150 Pte-Chr8 35496749 35499710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01150 20 260 Tify Gene Family AT1G51600 48.438 7.02e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte8g01150 CCT 1.3e-13 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01150 - - qsa:O6P43_019551 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01150 8 35496749 35499710 Pte8g01150 8 35496749 35499710 RCT