Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01146 ATGGAAATTCTAATCGCCAATTCTTCATCAAAAAGATTGGTTCTATGGATGTTGATGTACTTATCTGGCTTGGTTGCTATTAGCATGTCGTCCCCAGGAGTAAAATTGTATATCCAAGATAACTATGTAGCGATGGATAATGAAGTGGTTCAACTTACAATATCAACTCCAGATGGATTTGTCACTGGTATCCAATATAATGGCATTGACAATTTGCTTGATGTCCTTCACCATGAAAACAACAGAGGGTACTATGATGTCGTGTGGAACCTGGCAGGAAGTCCAGGAACCAAGGGTAAATTTGACAGGTTAGAAGCAACAGACTTCAGGGTGGTGGTGGAAAATGAAGAACAAGTGGAGCTCTCGTTCACCAGAATGTGGAATTCCTCCTTCGATGGCAAGCTTGTTCCCTTGAATATAGACAAGAGGTTTGTCATGCTGAATGGTTCTTCGGGCTTTTATACCTATGCTATTTATGAGCATTTGAAGGAATGGCCTGCATTCAATCTTGACAACACCAGGGCTGTGTTCAAGCTTAGAAAAGACAAGTGGATGACAAATACCAATACTCTTGTGAGAGTCAGAATAATCAAGTTCATGGTTGGATATGTACTGACCCACCTACTGGATTTTGGCAAATTACGCCCAGCACAGAATTCCGGTCCGCTGGGCCTCTCAAACAGTATATTACATCCCACGTCGGCCCAAATACTCTCTCTGTAA 723 0.4205 MEILIANSSSKRLVLWMLMYLSGLVAISMSSPGVKLYIQDNYVAMDNEVVQLTISTPDGFVTGIQYNGIDNLLDVLHHENNRGYYDVVWNLAGSPGTKGKFDRLEATDFRVVVENEEQVELSFTRMWNSSFDGKLVPLNIDKRFVMLNGSSGFYTYAIYEHLKEWPAFNLDNTRAVFKLRKDKWMTNTNTLVRVRIIKFMVGYVLTHLLDFGKLRPAQNSGPLGLSNSILHPTSAQILSL* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01146 240 Pfam Rhamnogalacturonate lyase family 36 185 IPR010325 -
Pte8g01146 240 PANTHER RHAMNOGALACTURONATE LYASE FAMILY PROTEIN 35 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01146 Pte-Chr8 35483374 35485351 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01146 29 199 Polysaccharide Lyase AT1G09910 57.310 4.80e-63 206
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01146 K18195 - qsa:O6P43_019547 248.825