Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01139 ATGGAGTTGAATGGGAATGATTTCTTAGAGGAATTACTAGCTCCAAGACAAGAAACATGGGAAACCATGAATCCATTAGAGAGTACTAGTGATCAGCAGTTCTTCAGTAGTGCCTTGAGTTTTGATACCTTTGATCATTACATCAATAACCCTCTAGCTATTTCCCAAAGTGTTCACGAGGAACATTATCACAACAGCAACATTAGCAACGACGATTACATGTTTCTTAATGATGTCTATGATCCTTTTCTTGATGAATTATCATTACCCCATATTACAGATTCATCGTACAACACTCCGATGGATACTTCATTTGATGATACTCATACTACTCCTTTCATGGCTCGAGAAGAATACCCGCTGTCGTTTTTTGAAGAGGATGATCCAACGAGCTTTTTAGAGGTAGAGATGTGCAATGAGGAATCACCAGTTCAATGTAAACTGGAGCATGCAATGCAGAAATCTCCTGAAATGCCAGGTTTCAAGGTTGGTGCCTGTGCTGAAAGAAAGATGAATCGATCTAAGAAGTTGCAAGGTCAGCCTTCAAAGAATCTAATGGCTGAGAGACGAAGAAGGAAGAGACTCAATGACCGCCTTTCCATGCTTAGAGCAATAGTCCCAAAGATAAGCAAGATGGATAGAACCTCGATACTTGGAGACACGATAGATTACATGAAAGAACTGCTGGAGAGGATCAACAATCTGCAGCAAGAAATCGAAGGAAATTCAAACGTGGAGGGTATTTTCAAGGATGCAAAACCAAATGAAATTTTAGTGAGAAACTCACCTAAGTTTGATGTGGAGAGGAGGGATGTTGACACCAGAATTGAAATATGCTGTGCAGGCAAGCCAGGGTTGTTGCTAACCATGGTGGATACTCTGGAAGCATTAGGACTTGAAATCCAGCAGTGTGTTATTAGTTGTTTCAGTGATTTCGCAATGCAAGCCTCTTGCTCTGAGGAGTTGGACCAGAGGAGGGCAACAAGTAGTAAAGACATAAAGCAAGCATTGTTCATAAATGCAGGTTATGGTGGAAGGTGTTTGTAG 1047 0.4097 MELNGNDFLEELLAPRQETWETMNPLESTSDQQFFSSALSFDTFDHYINNPLAISQSVHEEHYHNSNISNDDYMFLNDVYDPFLDELSLPHITDSSYNTPMDTSFDDTHTTPFMAREEYPLSFFEEDDPTSFLEVEMCNEESPVQCKLEHAMQKSPEMPGFKVGACAERKMNRSKKLQGQPSKNLMAERRRRKRLNDRLSMLRAIVPKISKMDRTSILGDTIDYMKELLERINNLQQEIEGNSNVEGIFKDAKPNEILVRNSPKFDVERRDVDTRIEICCAGKPGLLLTMVDTLEALGLEIQQCVISCFSDFAMQASCSEELDQRRATSSKDIKQALFINAGYGGRCL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01139 348 Pfam Helix-loop-helix DNA-binding domain 185 228 IPR011598 GO:0046983
Pte8g01139 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 183 241 IPR036638 GO:0046983
Pte8g01139 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 179 228 IPR011598 GO:0046983
Pte8g01139 348 Gene3D - 168 244 IPR036638 GO:0046983
Pte8g01139 348 SMART finulus 185 234 IPR011598 GO:0046983
Pte8g01139 348 Coils Coil 218 245 - -
Pte8g01139 348 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 63 338 - -
Pte8g01139 348 CDD ACT_UUR-ACR-like 274 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01139 Pte-Chr8 35436457 35437804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01139 161 349 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 63.021 3.00e-72 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte8g01139 HLH 1.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01139 - - qsa:O6P43_019531 394.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte8g01139 8 35436457 35437804 Pte8g01139 8 35436457 35437804 RCT