Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01129 ATGTCATCTGCGAATGCTTATCGCCAAGGCCATTTTCTCTGCTATCTCCTCTGTTTCCTATGTTTACTCTCCGGAGCAAAAACTGATGAGCTCCAAAGTCTATTGAAGCTGAAGTCTGCACTTGATAATTCAAACTCCAACGTATTTTCCTCTTGGTTGACCACCAACTCTCCATGCAACTTCACTGGAATCAATTGCAATTCAGACGGTACAGTTAGAGAAATCGAGCTTTCAAGTTCGAAGCTTTCTGGGGTCCTTCCTTACGATTCTATATGTCAGTTGAGATCACTTGAAAAACTCTCTCTGGGATTCAACGCCTTGTCTGGTAGAGTCACAGAGGATTTGAATAACTGTGTTAAATTGAAGTACTTGGACTTGGGTAACAATCGTTTCACCGGAACCTTCCCTGACATCTCCTCTCTCAGTGAATTACGGTATCTATATGTGAATAATAGCGGATTTTCAGGCAGTTTTCCATGGAAATCACTCCAAAATATGTCTGGTCTCTTGCATCTGAGCCTTGGGGAAAACCCTTTCCATCCAACTCCTTTTCCAAAAGAGGTTTTGAATCTCACGAACTTGAATTTGCTCTATCTCTCCAATACCAACATGGAAGGTGAAATACCAACTGGAATAGGAGACCTGTCAAAGCTTGTGAATTTTGAGGTCTCAAACAATTTAATGTCAGGTAATATCCCAGTAGAGATTGGAAACCTCAGTAATCTCTGGCAGCTTGAGCTCTACAACAACCAATTCACCGGTCAAATTCCAGAGGGATTTAGAAATCTGATAAAACTCGAAAACTTTGATGCGTCCATGAATTTTCTTGAAGGTAATCTATCGGAGTTGGGGTACTTGAATAATTTGGTTTCTCTGCAACTGTTTGAGAACAACTTCGTTGGGCAAATCCCACCAGAGTTTGGCGAGTTCAGAAGGCTTGTTAATATTTCTCTGTATAGAAACCAATTGACAGGTCCTGTTCCTGAAAAGATTGGCTCGTGGTCTGAGTTTGACTTCATTGATGTATCAGAAAACTTTCTAACAGGTCCAATCCCACCACATATGTGCAACAAGAGAACCATGAGAGGACTACTCATGCTTCAGAACAATCTTACTGGTGAAATTCCTTCCAGTTATGCAAATTGTTCTTCTTTACTTAGATTTAGAGTTAGCAACAACTCGCTTTCAGGTAATGTTCCTTCTGGAATATGGGGTTTACCTAACGTAGTTATTATCGATATAGAATCGAATCATTTAGAGGGATCAATATCACCAGAAATTCAAAAAGCCAAGAGTCTAGCTCAAATTTATTGCAGAAAGAATCGATTGAGGGGCGAGTTACCTGAAGAGATATCAAAGGTTACATCTTTGATAGTAATTGATCTAAGTGAGAATCAATTCTCTGGGAGAATTCCTGAGGGTATAGGTGAGCTCAAACAACTGAGTACTCTCCATTTACAGAAGAACCAGTTAGATGGGGCTATACCAGAATCATTAGGATCTTGTTCTTCCCTCAATGACATTAACATTGCCATGAATTCAATTTCCGGTAACATCCCATCATCTTTAGGGTCGTTACCATCGCTGAATGCTCTGAATTTGTCTCAGAATGGACTCAATGGACAAATCCCAGAGAGTTTTCAATCACTCAGGCTAAGCCTTCTTGATCTCTCAAATAACCAGTTATATGGTCCAATACCACAATCTCTGTCTATAGCAGCCTACAATGGCAGCTTTACTGGGAATACAGGTCTATGCAGCCGTGACAAGATCCGATCATTCAAGAGCTGTTCTTCAAGAAGTTCTGGCATGTCCAAAAATATCCATACTCTCATAGCTTGTTTTGTTGTATCCGTAGTGATGTTGTCACTACTGCTAGCTTATTTGATTTTTTTAAAGAAGAAAGAAAGTCGAAGGAAACGTTCGCTAAAGGAAGAATCTTGGAATATGAAATCATTCCATGTGCTGAATTTCACAGAAGATGAGATTCTAGCAGCCATTAAAGAAGAGAATCTTATTGGAACTGGAGGTTCAGGCAATGTCTACAAAGTACAGCTTCCAAATGGAAAAGAGCTTGCAGTGAAGCATATATGGAACTCTGACCTCCGTGGACGGAAAAAGAGTGGAAGCACTACTGCCATGCTTGGGAGGCGTGGTGGGAAGTCAAAGGAATTCGATGCAGAGGTTCAGAGCTTAAGCTCAATAAGACATGTAAATGTCGTAAAGCTTTACTGTAGTATCACAAACGAGGATTCAAGTCTGTTGGTGTACGAGTACTTGCCCAATGGAAGCTTGTGGGATCGACTTCACAGTTCCCAGAAAGTGGAGCTTGATTGGGACACAAGGTATGACATTGCTCTAGGTGCAGCAAAAGGTTTGGAGTATCTTCATCATGGTTGTGAGAAGCCTGTGGTCCACAGGGATGTCAAGTCCAGTAACATATTGTTGGACGAGTTCTTGAAGCCAAGGATTGCAGATTTTGGGCTAGCTAAGGTTGTTCATGGAAGTAGTGGCAAAGATTCTACTCATGTTATTCCAGGAACTTTTGGCTACATTGCTCCTGAGTATGGATACACCAGCAAGGTGAATGAGAAAATTGATGTGTATAGCTTTGGGGTGGTTCTAATGGAATTGGTGACTGGCAAAAGGCCTATGGAACCTGAGTTTGGAGAGAATAAGGATATTGTCTACTGGGTATATAGCAACATGAAAACTAAGGAGACCATATTGAAGGTGGTGGTAGATTCTAGGATTCCAGACCATCACAAAGAAGAAGCTGTCAAGGTACTAAGGATTGCTCTTCTGTGCACATCAAGGGTTCCAACCTTGAGGCCTGCAATGAGAGCTGTGGTCCAAATGCTGGAAGAAGTTGAGCCATGTAAACTGGTTGGGATTGTCATTAACAAAAATGGCACCAAAGCTACTAAAAAAGAAAGTGCTTGA 2943 0.4115 MSSANAYRQGHFLCYLLCFLCLLSGAKTDELQSLLKLKSALDNSNSNVFSSWLTTNSPCNFTGINCNSDGTVREIELSSSKLSGVLPYDSICQLRSLEKLSLGFNALSGRVTEDLNNCVKLKYLDLGNNRFTGTFPDISSLSELRYLYVNNSGFSGSFPWKSLQNMSGLLHLSLGENPFHPTPFPKEVLNLTNLNLLYLSNTNMEGEIPTGIGDLSKLVNFEVSNNLMSGNIPVEIGNLSNLWQLELYNNQFTGQIPEGFRNLIKLENFDASMNFLEGNLSELGYLNNLVSLQLFENNFVGQIPPEFGEFRRLVNISLYRNQLTGPVPEKIGSWSEFDFIDVSENFLTGPIPPHMCNKRTMRGLLMLQNNLTGEIPSSYANCSSLLRFRVSNNSLSGNVPSGIWGLPNVVIIDIESNHLEGSISPEIQKAKSLAQIYCRKNRLRGELPEEISKVTSLIVIDLSENQFSGRIPEGIGELKQLSTLHLQKNQLDGAIPESLGSCSSLNDINIAMNSISGNIPSSLGSLPSLNALNLSQNGLNGQIPESFQSLRLSLLDLSNNQLYGPIPQSLSIAAYNGSFTGNTGLCSRDKIRSFKSCSSRSSGMSKNIHTLIACFVVSVVMLSLLLAYLIFLKKKESRRKRSLKEESWNMKSFHVLNFTEDEILAAIKEENLIGTGGSGNVYKVQLPNGKELAVKHIWNSDLRGRKKSGSTTAMLGRRGGKSKEFDAEVQSLSSIRHVNVVKLYCSITNEDSSLLVYEYLPNGSLWDRLHSSQKVELDWDTRYDIALGAAKGLEYLHHGCEKPVVHRDVKSSNILLDEFLKPRIADFGLAKVVHGSSGKDSTHVIPGTFGYIAPEYGYTSKVNEKIDVYSFGVVLMELVTGKRPMEPEFGENKDIVYWVYSNMKTKETILKVVVDSRIPDHHKEEAVKVLRIALLCTSRVPTLRPAMRAVVQMLEEVEPCKLVGIVINKNGTKATKKESA* 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01129 980 SUPERFAMILY Protein kinase-like (PK-like) 664 955 IPR011009 -
Pte8g01129 980 FunFam Leucine-rich receptor-like protein kinase family protein 184 282 - -
Pte8g01129 980 ProSitePatterns Protein kinases ATP-binding region signature. 673 695 IPR017441 GO:0005524
Pte8g01129 980 SMART serkin_6 667 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01129 980 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 760 970 - -
Pte8g01129 980 Gene3D Phosphorylase Kinase; domain 1 631 759 - -
Pte8g01129 980 FunFam Leucine-rich repeat receptor-like protein kinase TDR 283 599 - -
Pte8g01129 980 FunFam Receptor-like protein kinase HAIKU2 650 759 - -
Pte8g01129 980 FunFam Probable inactive receptor kinase RLK902 27 183 - -
Pte8g01129 980 Gene3D Ribonuclease Inhibitor 183 281 IPR032675 -
Pte8g01129 980 Gene3D Ribonuclease Inhibitor 29 182 IPR032675 -
Pte8g01129 980 SUPERFAMILY L domain-like 276 596 - -
Pte8g01129 980 Pfam Protein kinase domain 669 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01129 980 ProSiteProfiles Leucine-rich repeat profile. 120 142 IPR001611 GO:0005515
Pte8g01129 980 Gene3D Transferase(Phosphotransferase) domain 1 760 965 - -
Pte8g01129 980 SUPERFAMILY L domain-like 52 356 - -
Pte8g01129 980 ProSitePatterns Serine/Threonine protein kinases active-site signature. 804 816 IPR008271 GO:0004672|GO:0006468
Pte8g01129 980 Gene3D Ribonuclease Inhibitor 282 356 IPR032675 -
Pte8g01129 980 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 954 - -
Pte8g01129 980 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Pte8g01129 980 Gene3D Ribonuclease Inhibitor 357 604 IPR032675 -
Pte8g01129 980 ProSiteProfiles Protein kinase domain profile. 667 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01129 980 SMART LRR_typ_2 526 549 IPR003591 -
Pte8g01129 980 SMART LRR_typ_2 478 502 IPR003591 -
Pte8g01129 980 SMART LRR_typ_2 94 118 IPR003591 -
Pte8g01129 980 SMART LRR_typ_2 239 262 IPR003591 -
Pte8g01129 980 SMART LRR_typ_2 191 215 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01129 Pte-Chr8 35349720 35353510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01129 4 979 Receptor kinase-like Gene Family AT1G09970 59.594 0.0 1135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pte8g01129 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01129 - - qsa:O6P43_015409 1402.11