Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01123 ATGGCGATCGCTGCAGAGACCCAACCACAAGACAAGAATTCTTCAGAGACTTCAGCTGTCGAGAAAAGAAGATGGACACTCAATGACTTTGACATTGGAAAGCCTCTGGGTAGGGGAAAGTTTGGCCACGTCTATTTAGCAAGAGAAAAGAGGAGCAACCATATCGTTGCACTTAAAGTCCTCTTTAAGAGCCAACTGCAGCAATCTCAGGTTGAGCATCAGCTTCGGAGGGAAGTTGAAATACAAAGTCATCTGCGACATCCAAACATTTTACGCCTTTATGGTTACTTCTATGATCAGAAACGAGTCTATTTGATTTTGGAACATGCTCCCAGAGGTGAACTTTACAAAGAACTTCAGAAGTGCAAATACTTCAGTGAAAGACGTTCAGCTACTTATGTTGCATCGCTAGCACGAGCACTCATTTATTGCCATGGAAAGCATGTGATTCATAGAGACATCAAACCAGAGAACCTTCTCATTGGTGCACAGGGTGAACTGAAGATAGCAGATTTTGGATGGTCAGTGCACACATTTAATCGCAGGAGGACCATGTGTGGTACTCTAGATTACCTTCCTCCTGAGATGGTTGAAAGTGTAGACCATGATGCAAGTGTGGACATATGGAGTCTTGGTGTTCTCTGTTATGAGTTTCTTTATGGAGTCCCTCCATTTGAGGCCAAGGAGCATTCTGATACCTACAGAAGGATAATTCAAGTTGATCTTAAGTTCCCTCCAAAACCCATTGTCTCTTCTGCTGCAAAGGATCTCATTAGTCAGATGCTTGTGAAGGATTCATCACAACGTCTGCCTTTACACAAACTTCTTGAACATCCATGGATTGTTCAGAACGCAGAGGCCTCGGGTATATACAAGGGTTAA 882 0.432 MAIAAETQPQDKNSSETSAVEKRRWTLNDFDIGKPLGRGKFGHVYLAREKRSNHIVALKVLFKSQLQQSQVEHQLRREVEIQSHLRHPNILRLYGYFYDQKRVYLILEHAPRGELYKELQKCKYFSERRSATYVASLARALIYCHGKHVIHRDIKPENLLIGAQGELKIADFGWSVHTFNRRRTMCGTLDYLPPEMVESVDHDASVDIWSLGVLCYEFLYGVPPFEAKEHSDTYRRIIQVDLKFPPKPIVSSAAKDLISQMLVKDSSQRLPLHKLLEHPWIVQNAEASGIYKG* 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01123 293 MobiDBLite consensus disorder prediction 1 20 - -
Pte8g01123 293 FunFam Aurora kinase A 22 113 - -
Pte8g01123 293 Gene3D Transferase(Phosphotransferase) domain 1 114 290 - -
Pte8g01123 293 Gene3D Phosphorylase Kinase; domain 1 17 113 - -
Pte8g01123 293 SMART serkin_6 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01123 293 CDD STKc_Aurora 29 282 - -
Pte8g01123 293 ProSiteProfiles Protein kinase domain profile. 30 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01123 293 PIRSF ILK 3 279 - -
Pte8g01123 293 FunFam serine/threonine-protein kinase Aurora-1 114 289 - -
Pte8g01123 293 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
Pte8g01123 293 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524
Pte8g01123 293 Pfam Protein kinase domain 32 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01123 293 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Pte8g01123 293 PANTHER SERINE/THREONINE-PROTEIN KINASE IAL-RELATED 10 288 IPR030616 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01123 Pte-Chr8 35289281 35292230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01123 21 284 CBL-interacting serine-threonine protein kinases AT5G10930 35.793 9.83e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Aur Pte8g01123 Pkinase 3.2e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01123 K08850 - qsa:O6P43_015468 573.548