Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01111 ATGATGGCGGTGAGTTCAAGCTGCAAAGATGGCAGCAGTAGCAGTAAGTTTATAATGGATAATGGCAAGTACGTCCGATACACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTACCACGAATGCCCAAAGCCCAGTTCCATGCGACGCCAGCTGCTCATCAGAGAGTGCCCCATTCTTTCGAACATAGAGCCTAAGCAGATCAAAGTTTGGTTTCAAAATCGAAGATGCAGAGAGAAGCAGCGCAAAGAGTCAGCACGCCTGCAAGCTGTTAACAGGAAACTCGCAGCAATGAATAAACTCTTGATGGAGGAAAATGAGAGATTGCAGAAACAGGTGTCTCATCTGGTGTACGAGAACAGTTTTTTCCGACAGCAGACACAGAATACTACCCTTGCGACCACTGATACAAGTTGTGAGTCCGTGATAACTAGTGGTCAGCACCATTTGACACCTCAACATCCGCCAAGAGATGCCAGCCCTGCAGGACTTATGTCCATTGCAGAGGAGACTTTAACAGAGTTTCTTTCAAAGGCAACTGGAACAGCCGTGGAGTGGGTCCAAATGCCTGGGATGAAGCCTGGTCCGGATTCCGTTGGAATCATTGCTATTTCTCGTGGTTGCCCTGGAGTGGCAGCCCGTGCATGTGGCCTTGTAGGTCTGGAGCCTTCAAGGGTTGCTGAAATTCTCAAAGATCGTCCTTCCTGGTACCGTGATTGCCGAGCTGTGGATGTTCTAAATTCAATGTCCACAGGAAATGGTGGAAAAATTGAACTACTTTACATGCAGATGTATGCGCCAACAACTTTGGCACCGGCTCGTGACTTCTGGCTGCTGCGCTATACATCTGTTTTGGAGGATGGTAGTATTGTGGTATGTGAAAGGTCACTCAACAACACTCAGAATGGTCCTAGCATGCCGCCGGTGCAGCATTTTGTGAGAGCAGACATGCTACCTAGTGGTTATCTGATTAGACCATGTGAAGGAGGAGGATCCATCATTCATATAGTAAACCATGTGGATTTGGAGTCTTGGAGTGTACCCGAAGTATTACGTCCACTATATGAATCATCAACATTGCTTGCTCAGAGGACCACAATGGCGGCTTTTCGTTTTTTAAGGCAGATCTCCCAAGAAGTTTCTCAACCAAATGTTTCAGGGTGGGGAAGGAGACCTGCAGCACTGCGTGGTCTTAGTCAACGTTTGAGCAAGGGCTTTAATGAAGCAATCAATGGTTTTTCAGACGATGGATGGTTGATGTTAGATAGTGATGGCATTGATGATGTTACCGTACTTGTCAATTCATCTCCCACCAAGGTTGTAGGCTCAAGCCCTTCTTATGCCAATGGCTTTCCTTCAATGAACAATGCTGTGCTGTGTGCTAAAGCATCCATGCTGTTACAGAATGTGCCTCCAGCAATACTTCTGAGATTCTTGCGGGAACATCGGTCGGAGTGGGCAGACAATAGCATTGATGCTTACTCCGCTACTGCCATTAAAGCTGGCCCCTGCATCTTGCCAGGGCCTCGAGCAGGAAGCTTTGCTGGTCAAGTTATTCTTCCTCTAGCTCACACAAGTGAGCAAGAAGAGTTCTTGGAGGTCATTAAGCTTGAAAGTATGGGCTACTACAGGGAGGACATGACTATGGCCAGTGATATCTTCTTCTTGCAACTTTGTAGCGGAGTAGATGAGAATGCTATTGGCACCTGTGCAGAACTCATGTTTGCTCCCATTGACGCCTCTTTTTCTGATGATGCTCCAATAATACCTTCTGGTTTTCGTATCATCCCCCTTGATTCTGGAATGGATACTACTAACGTGAACCGTACACTCGACCTTGCTTCTGCTCTGGAAATTGGACCAACAGGAAATAAAACGCCCAGTGATAGTTCTACTAATCCGGGAAGCAGTAAATATGTAATGACAATAGCATTTCAGTTTGCCTTTGAAATACACCTCCAAGATAATATAGCAGTCATGGCTCGTCAATATGTTCGAAGTATTATTGCATCTGTTCAGAGAGTGGCATTAGCACTTTCTCCTTCACGCTTGGGCTGTCATACCGGTTTCCGGCTACCACCTGGCACTCCGGAGGCACAGACTCTTGCTCGATGGATCTGCCAGAGCTACAGATGCTATCTGGGAGTTGAGCTATTGAAATGTGAAGGTAGTGAATCCATCCTGAAATCCCTTTGGCTTCATTCTGATGCGATAATGTGCTGCTCTCTGAAGGCATTGCCCGTTTTTACATTTGCAAATCAAGCGGGACTTGACATGCTGGAGACAACATTGGTTGCTCTTCAGGACGTTACATTGGAAAAGATCTTTGACGACAATGGAAAGAAAACCCTGTGCTCTGAGTTCCCACAGATTTTGCAACAAGGTTTTATGTGCCTTCAAGGTGGTATTTGTTTATCTAGCATGGGAAGGCCTGTGTCTTATGAGAGAGCAGTGGCCTGGAAAGTATTGAACGAAGAAGAAGACGACGCTCACTGCATTTGTTTCATGTTCATGAACTGGTCCTTTGTGTGA 2532 0.4637 MMAVSSSCKDGSSSSKFIMDNGKYVRYTPEQVEALERLYHECPKPSSMRRQLLIRECPILSNIEPKQIKVWFQNRRCREKQRKESARLQAVNRKLAAMNKLLMEENERLQKQVSHLVYENSFFRQQTQNTTLATTDTSCESVITSGQHHLTPQHPPRDASPAGLMSIAEETLTEFLSKATGTAVEWVQMPGMKPGPDSVGIIAISRGCPGVAARACGLVGLEPSRVAEILKDRPSWYRDCRAVDVLNSMSTGNGGKIELLYMQMYAPTTLAPARDFWLLRYTSVLEDGSIVVCERSLNNTQNGPSMPPVQHFVRADMLPSGYLIRPCEGGGSIIHIVNHVDLESWSVPEVLRPLYESSTLLAQRTTMAAFRFLRQISQEVSQPNVSGWGRRPAALRGLSQRLSKGFNEAINGFSDDGWLMLDSDGIDDVTVLVNSSPTKVVGSSPSYANGFPSMNNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNSIDAYSATAIKAGPCILPGPRAGSFAGQVILPLAHTSEQEEFLEVIKLESMGYYREDMTMASDIFFLQLCSGVDENAIGTCAELMFAPIDASFSDDAPIIPSGFRIIPLDSGMDTTNVNRTLDLASALEIGPTGNKTPSDSSTNPGSSKYVMTIAFQFAFEIHLQDNIAVMARQYVRSIIASVQRVALALSPSRLGCHTGFRLPPGTPEAQTLARWICQSYRCYLGVELLKCEGSESILKSLWLHSDAIMCCSLKALPVFTFANQAGLDMLETTLVALQDVTLEKIFDDNGKKTLCSEFPQILQQGFMCLQGGICLSSMGRPVSYERAVAWKVLNEEEDDAHCICFMFMNWSFV* 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01111 843 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 19 843 IPR044830 GO:0003700
Pte8g01111 843 CDD homeodomain 23 83 IPR001356 GO:0003677
Pte8g01111 843 Gene3D - 15 90 - -
Pte8g01111 843 ProSiteProfiles 'Homeobox' domain profile. 18 82 IPR001356 GO:0003677
Pte8g01111 843 SUPERFAMILY Bet v1-like 166 376 - -
Pte8g01111 843 CDD bZIP 75 114 - -
Pte8g01111 843 SUPERFAMILY Homeodomain-like 22 85 IPR009057 -
Pte8g01111 843 CDD START_ArGLABRA2_like 161 376 - -
Pte8g01111 843 ProSiteProfiles START domain profile. 157 385 IPR002913 GO:0008289
Pte8g01111 843 Pfam MEKHLA domain 701 842 IPR013978 -
Pte8g01111 843 Pfam Homeodomain 23 81 IPR001356 GO:0003677
Pte8g01111 843 SMART HOX_1 20 86 IPR001356 GO:0003677
Pte8g01111 843 FunFam Homeobox-leucine zipper protein REVOLUTA 23 78 - -
Pte8g01111 843 Gene3D - 199 376 IPR023393 -
Pte8g01111 843 SMART START_1 166 376 IPR002913 GO:0008289
Pte8g01111 843 Pfam START domain 167 371 IPR002913 GO:0008289
Pte8g01111 843 Coils Coil 88 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01111 Pte-Chr8 35207129 35214486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01111 11 844 Homeobox Transcription Factor Family AT4G32880 79.236 0.0 1387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pte8g01111 START 1.3e-51 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01111 K09338 - zju:107420449 1483