Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01102 ATGGGTGCTGAACAAAATAACTATGAAGCTGAAAGCAGATTTAATTCGTTCACATCGCTACCGCTATCACCATCTTCTTCAGTTGGGTCCCTCCAAAATTCAGTTTCACAGTCCAAACCTCAAAACGCTGAAGCTAAAAACATCAAACGAATCAGAGACTCTAGCAAACACCCAGTTTATCGTGGTGTCAGGATGCGTAGTTGGGGTAAATGGGTGTCAGAAATTCGTGAGCCAAGAAAGAAATCTCGCATATGGCTTGGTACATTCCCTAACCCTGAAATGGCAGCCAGAGCACACGACGTTGCTGCTTTGAGCATCAAAGGCAATTCTGTCATTCTCAATTTCCCTGAACTAGCGAACTTGTTGCCTCGTCCAGTGTCACTGTCTCCTAGAGATATTCAGGCAGCAGCAGCAAAAGCTGCACAAATGGATAAATTTGACTCTCCATCCTCTTCCTCATCCTCTTCCACACTGTCATCATCATTGTCTTCTCTGGTCTCTGCGATGGATTTGTCAACCGGGTCCGAGGAGCTAAGCGAGATAGTAACTTTGCCAAGCTTAGATGACAGTTACGAGACAAAAGAGTTGGGAAAGGAGTTCATGTTCGTGGAATCTATGGATGAGTGGATGTACCCTCCACTATGGTTGCAGAGTTTGCAAGATTGTGAAGGGTATGTTAGCAATGAACAGTTAGCAGCAGCGCCAGAAACCATGACATCAAGTAGCTTTGACAGTTTTCTATGGAACTATTAA 753 0.4449 MGAEQNNYEAESRFNSFTSLPLSPSSSVGSLQNSVSQSKPQNAEAKNIKRIRDSSKHPVYRGVRMRSWGKWVSEIREPRKKSRIWLGTFPNPEMAARAHDVAALSIKGNSVILNFPELANLLPRPVSLSPRDIQAAAAKAAQMDKFDSPSSSSSSSTLSSSLSSLVSAMDLSTGSEELSEIVTLPSLDDSYETKELGKEFMFVESMDEWMYPPLWLQSLQDCEGYVSNEQLAAAPETMTSSSFDSFLWNY* 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01102 250 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 CDD AP2 60 118 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 Pfam AP2 domain 58 108 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 MobiDBLite consensus disorder prediction 22 44 - -
Pte8g01102 250 Gene3D AP2/ERF domain 59 117 IPR036955 GO:0003700|GO:0006355
Pte8g01102 250 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Pte8g01102 250 FunFam Ethylene-responsive transcription factor 2 58 117 - -
Pte8g01102 250 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 193 - -
Pte8g01102 250 MobiDBLite consensus disorder prediction 22 47 - -
Pte8g01102 250 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01102 Pte-Chr8 35110599 35111722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01102 33 225 AP2-EREBP Transcription Factor Family AT5G11590 66.332 2.50e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte8g01102 AP2 2.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01102 K09286 - qsa:O6P43_015497 310.842