Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01098 ATGGAGAGGATCGTGGGAGGGAAATTTAAGATGGGTCGGAAAATTGGGAGTGGATCGTTTGGTGAAATTTATTTGGCTACCGATTTGGATTCTGGGGAGATTTTGGCCGTGAAAATGGAAAACAGCCAGACAAAACATCCACAACTATTCTATGAGGCGAAGCTGTATGAGATTCTTCAACGAGAGGGTGGTATTCCTAGTATAAAATGGTGTGGAACTGATGGGGAAAACAATGTTCTAGTCATGGATCTTCTTGGACCAAGTCTTGAGGATCTCTTTGTATACTGTGGGAGGAAGTTTTCTTTGAAGACAGTCTTGATGTTGGCTGATCAGATGATTACAAGAGTAGAATATATGCATTCGAAAGGGTTTCTGCACAGAGACATAAAACCAGATAATTTTCTCATGGGTCTTGGTAAGAAAGCAAATCAGGTTTACGTTATTGATTTTGGGCTTGCAAAAAGGTACAGAGATCCTGCTACCAACAGGCATATCCCGTACAAAGAGAACAAAAATTTAACAGGCACTGCCAGGTATGCTAGTTGGAATACCCATTTAGGGATTGAACAAAGCCGCCGGGATGATTTGGAGTCTCTTGGATATGTTTTGCTATACTTTCTAAGAGGGAGCCTTCCTTGGCAAGGCCTAAAAGCTGGCACTAAAAAGCAAAAATATGACAAGATTTGTGAGAAGAAAGTATCAACTCCCATTGAGATTCTCTGCAAATCATATCCTGTGGAGTTTGCATCTTACTTCCATTACTGCCACTCTTTGAAATTTGATCAACGGCCTGATTATGGGTTTCTGAAGCGATTATTCCGTGACTTGTCTTCTCGCGAAGGATATGATTTTGACTATGTATATGACTGGACTATTCTAAAGTATCAGAAGACACAGCGGAAGAAGACACTGCGTAACTTAAATCAAGTTTCTGGAGTAACTGGTGTTGAGGCAATGCAAACAGATGCAAATAAACAGAAAGAAGTCAACGATTCTTCTCACTCAACTTGGACTGGAGAGCCTAGAGGGTTGACAAATGTTGGTTGTCCATATAATCATCCTCAGTATAGACCATTCCAATTAAAAACCAAAAATTTGGTAGAGAAGCATACAATAAGCAAGGGGCCGTCAAACTCTGCAATGCTTGGTTTCTCTCGAGATAATATTTCCCAACAAGAGAGGCCTGTAGAAACTTCAAAAACAGCTCGCAGATTTGGTAACAAAGTTGATACTTCAAGCAATCGGAACCCGGCATTACGCCGGATATCTTCAACAAAGTAA 1281 0.4067 MERIVGGKFKMGRKIGSGSFGEIYLATDLDSGEILAVKMENSQTKHPQLFYEAKLYEILQREGGIPSIKWCGTDGENNVLVMDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRVEYMHSKGFLHRDIKPDNFLMGLGKKANQVYVIDFGLAKRYRDPATNRHIPYKENKNLTGTARYASWNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAGTKKQKYDKICEKKVSTPIEILCKSYPVEFASYFHYCHSLKFDQRPDYGFLKRLFRDLSSREGYDFDYVYDWTILKYQKTQRKKTLRNLNQVSGVTGVEAMQTDANKQKEVNDSSHSTWTGEPRGLTNVGCPYNHPQYRPFQLKTKNLVEKHTISKGPSNSAMLGFSRDNISQQERPVETSKTARRFGNKVDTSSNRNPALRRISSTK* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01098 426 FunFam Casein kinase I isoform delta-like 1 340 - -
Pte8g01098 426 MobiDBLite consensus disorder prediction 405 426 - -
Pte8g01098 426 ProSiteProfiles Protein kinase domain profile. 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01098 426 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pte8g01098 426 SMART serkin_6 9 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01098 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pte8g01098 426 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01098 426 PANTHER CASEIN KINASE-RELATED 13 328 - -
Pte8g01098 426 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pte8g01098 426 MobiDBLite consensus disorder prediction 373 426 - -
Pte8g01098 426 Gene3D Transferase(Phosphotransferase) domain 1 1 339 - -
Pte8g01098 426 MobiDBLite consensus disorder prediction 373 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01098 Pte-Chr8 35083524 35088382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01098 8 213 MAP Kinase Kinase Kinase AT3G06030 28.636 4.95e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pte8g01098 Pkinase 8.9e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01098 K08960 K08959 qsa:O6P43_015510 617.846