Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte8g01075 ATGCCTTTACTACTGTCGCCGGCTGCTGTGGAAACCGCTGTTCCACCACTTCCATTCATTTCGGTAGTGTCCCCAACAGCAGCAGCACCTACAATCTCATTGGCTCCGGTTGCTCCTACTCGGGTGTCTTCTTTACCACCGTCTGTGTCCCCTCCAACACAAGAAGTTTTGTTCCCTCCTGTGTCAAATCCTCCGGCCATATCTCAGGTGACTCCTATTTCACCAAACTTACCTCCTCCATCTCCCGCAGTCGCGTATTCGCCTTCTCCGGTGAATGTTGTGTTTCCACCTACACCGCCGGTGGTGTCTGCCATCCCACCTACTACGTTCATTTCGCCTACATTCCCCGCAATTGTCACAAATTCACCTCCTTCAACACCCCAATTGCCAAAAGAAAGGTTTCCTCATCACTCACCAGCGGTAACTGCTCTGCCGTCTCCGGTGATCCCAACAAAGCCAGCTCACAATTCTCCTCCGCACTTTCCAATCCCAGTGATTGCAAAGCTGCCTCCCCCATCTTCAGCAAACGTTTCGACATCTTCTCCTTCACCTCCAGCAATAACACTTGGAACGCCCTCGCCAGAAGCATTGCCATTAGGAATTCCTTCACCTCCCGCATCAACTGTAGGACCTCAGCCATCGCCTGCATTTACACCGGAAACTCAAGCACCAGCAGCATCTACCCACCCTTTCCCGGATAAAGATACTCCCAATACGCCAGTTCTTCTGCCACCACCTCCATCACCAACTTCAACTGCAAGTTTGGCAGTTCATGGAGAAGTTCAAAACCCACAGCCAAGAACCTCTACTATTCCTATTGGAATAACAGTTGGACTGGTGATTGGTGTTGTTTTCCTTGTAATGCTCTTAGTTGGTCTTCTGTACCTTTGTTGCAGATACAGAAGAACTAGAAGAAAGGAAACTAATCCTTGCTTTGATAACTGGAAGCAACCACGTTTTTTGGGATCGGACGGTGGCTCTAACGTTTTCCTACCTAAAAGTTCGAAAGAGTCGAATGTTATTCAAGTGCTGTCAAATGGCACCAGAGCTTCTGCATTTTCAAGTAGGGGCATGAAGAATGGAAACTCCCACCGTCCAAGTCTTGTGTTGGGTTCGTCCTGTTGCAGTTTCAGTTACGACGAACTATTTGCAGCTACCAATGGCTTCTCGGAGGCACACCTTCTTGGAGAAGGTGGTTTTAGTAATGTCTTCAAGGGAGTGCTTCCAAATTCAAAGGAAGTTGCAGTCAAGCAGTTGAAGACAGGAAGCAAACAAGTGGAGCGAGAATTTCAGGCTGAGGTTGAAACTATTAGCCGCGTTCATCACAAACATCTTGTATCATTAGTTGGATATTGCATCTCCGGCACAGAGAATTTGCTAGTCTATGAATTTGTTCCAAATAACACATTGGAATTCCACTTGCATGGGAAAGGCCAGCCTGTTATGGAGTGGGCAAATAGGATGAAAATCGCCATTGGATCTGCAAAAGGGCTGGCATATCTTCATGAAGATTGTAATCCAAGGATTGTTCACCGTGACATTAAGGCATCAAATATTCTCCTTGATTTTAGGTTTGAAGCAAAGCTTTCTGACTTTGGGCTAGCAAAAATATTTTCTGACACTACCAGTTGCATTTCTCACGTCACAACTCGAGTTGTGGGAACATTTGGGTATCTGGCTCCGGAGTATGCATCCAGTGGCAAAGTCACTGATAAATCAGATGTTTATTCATATGGGGTCATGCTTCTAGAACTAATAACGGGACGGCCACCCATCAGTGTGATAGAATCATCAAGAAATGAGAGCCTTGTTGAATGGGCTAGGCCTTTCATCCATCGAGCCCTTGAAGAAGGAGATTACAACAGTCTTGTTGATCCAAGACTTGAGAGGAATTACGATACCAATGAAATGGCCACAATGGTTGCTTGCGCAGCAGCTTGCGTTCGTCGTTCAGCAAGGCTACGACCGCGGATGAGCCAAATAGTTGGCGCTTTAGAAGGACTGGTTTCTGTTACTGATCTCCAGGAAGGTATTACACCGGGACACAGTACAATCTACAGTTGGTCGGCTACTTCAAATTACGATGCCAGTAAATACAAGGAGGATGTAAGGCACTTCAATATGGCCTTACTCAGCCAGGAGCACAGCACGGGCTGGTAA 2160 0.4685 MPLLLSPAAVETAVPPLPFISVVSPTAAAPTISLAPVAPTRVSSLPPSVSPPTQEVLFPPVSNPPAISQVTPISPNLPPPSPAVAYSPSPVNVVFPPTPPVVSAIPPTTFISPTFPAIVTNSPPSTPQLPKERFPHHSPAVTALPSPVIPTKPAHNSPPHFPIPVIAKLPPPSSANVSTSSPSPPAITLGTPSPEALPLGIPSPPASTVGPQPSPAFTPETQAPAASTHPFPDKDTPNTPVLLPPPPSPTSTASLAVHGEVQNPQPRTSTIPIGITVGLVIGVVFLVMLLVGLLYLCCRYRRTRRKETNPCFDNWKQPRFLGSDGGSNVFLPKSSKESNVIQVLSNGTRASAFSSRGMKNGNSHRPSLVLGSSCCSFSYDELFAATNGFSEAHLLGEGGFSNVFKGVLPNSKEVAVKQLKTGSKQVEREFQAEVETISRVHHKHLVSLVGYCISGTENLLVYEFVPNNTLEFHLHGKGQPVMEWANRMKIAIGSAKGLAYLHEDCNPRIVHRDIKASNILLDFRFEAKLSDFGLAKIFSDTTSCISHVTTRVVGTFGYLAPEYASSGKVTDKSDVYSYGVMLLELITGRPPISVIESSRNESLVEWARPFIHRALEEGDYNSLVDPRLERNYDTNEMATMVACAAACVRRSARLRPRMSQIVGALEGLVSVTDLQEGITPGHSTIYSWSATSNYDASKYKEDVRHFNMALLSQEHSTGW* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte8g01075 719 FunFam proline-rich receptor-like protein kinase PERK8 465 680 - -
Pte8g01075 719 ProSitePatterns Protein kinases ATP-binding region signature. 395 417 IPR017441 GO:0005524
Pte8g01075 719 Pfam Protein kinase domain 390 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01075 719 ProSiteProfiles Protein kinase domain profile. 389 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01075 719 SUPERFAMILY Protein kinase-like (PK-like) 363 665 IPR011009 -
Pte8g01075 719 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 284 707 IPR047117 -
Pte8g01075 719 MobiDBLite consensus disorder prediction 172 186 - -
Pte8g01075 719 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 363 464 - -
Pte8g01075 719 MobiDBLite consensus disorder prediction 187 212 - -
Pte8g01075 719 MobiDBLite consensus disorder prediction 172 254 - -
Pte8g01075 719 CDD STKc_IRAK 395 668 - -
Pte8g01075 719 Gene3D Phosphorylase Kinase; domain 1 350 464 - -
Pte8g01075 719 SMART serkin_6 389 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte8g01075 719 Gene3D Transferase(Phosphotransferase) domain 1 465 678 - -
Pte8g01075 719 MobiDBLite consensus disorder prediction 237 251 - -
Pte8g01075 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 509 521 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte8g01075 Pte-Chr8 34912268 34916352 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte8g01075 377 709 Trihelix Transcription Factor Family AT4G32710 65.766 4.21e-144 437
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pte8g01075 Pkinase 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte8g01075 - - qsa:O6P43_019302 582.022