LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte8g01056	ATGTGGTCGCAGAAGGGTAACGTGGAGAAGAAGGATGGGACAAATGGATTGGTGGCGGTGGCCATAGACAAAGACAAAGGAAGCCAAAATGCACTGAAATGGGCCATTGACCATCTCATACATAAAGGCCAAACTATTATTCTCATTCATGTCAAGGTTAAAACACCACCTTTAGCCTCGTCACAACCTCTTACAGCCCCAAGGGTAAACCACTTTTCTGGTGACGAGTGTCCATTAATATGCAAAAATCCTGATGCCCAAACGAAAGAAGTGTTCCTTCCATTTCGAGTTTTCTGTACACGAAAAGATGTTCAATGCAAAGACATCATATTGGAAGAATCAGATGTTGCAAAAGCTTTAAATGAATATGTTTCTCATACAGGAATCGAGCATCTGGTTATTGGTTCATCATCCAAAAATGGTTTGCTCAAAAGATTCAAGGTAGCAGACATTCCTGGATCTGTATCAAAAGGGGCTCCAGATTTTTGTACCGTTTATGTCATTAATAAAGGAAAGATTCAGTCAATGCGATCAGCCTCTCGTTCTGCCCCCTCCATCTCCCCATTGCGCAATCAATTATTGGGTCAATCCACTTCCAGATCAGAGACAGATGTGCGCATGCTCCCACCTAGTAACAAAGTAAATGAGAGGCGATCCTATGAGGCACCACGCAGATCACAAGAAGAACTAGATTCAATCAGGTCCCCATTCACTAGGAGAGGCATGAATATGAAGTCCTTCGGAGAAATTTCGGTCCCAGAGTCCGACATATCCTATGTCAGCTCAGGAAGACCAAGTGTAGACCGAATATTCCCTTCATTATATAGTGACAACATGGATACGTCAATGAGTAATGCTTCCCGACCGTCGTTCGGGTCGGATGTAGATGCAAGTCCCTGTAGTTTCGAGTCCATGAACTTTGGACGCAAGTCTTTGGATATCCTCTCTTCCCAGGACTTCTCATCATTTTCACAAGAAAGTGACCGTCTATCAACATCATCGCAGGCAATGGATGAAGTGGAGGCTGAGATGAGAAGATTAAGGCTAGAGCTGAAGCAGACAATGGAAATGTACAGTAATGCTTGCAAGGAAGCGCTCAGTGCAAAACAAAAGGCAATAGAGCTTCAGCGTTGGAAAATGGAGGAAGAACGGAGAATGGAAGAGACTAGAAATGCAGGAGAAGCTGCATTAGCTATTGTAGAAAAGGAGAAGGCTAAGTCAAGGGCAGCCATGGAGGCAGCTGAAGCACACAAAAGGCTTGCGGAACTAGAAGCACAAAAGAGAATCAATGCAGAAATGAAAGCATTTAGAGAAGCCGAAGAGAAGAAAAGGGCACTTGATGCTCTGGCAAACACAGATGTGAGGTATAGAAGATATTCAATAGAAGAAATTGAATCCGCAACGGAGTTCTTCGCTTCATCAAGGAAAATAGGGGAAGGTGGGTATGGTCCTGTATATAAATGTCATCTGGACCATACCCCAGTTGCTGTTAAGATTTTACGGCCGGATGCAGCCCAAGGTCGATCGCAATTCCAGCAGGAGGTTGAGGTACTTAGCTGCATAAGACATCCAAACATGGTACTACTCCTTGGAGCCTGCCCTGAATATGGTTGCTTGGTGTATGAATACATGGCTAATGGGAGTTTGGATGATTGCTTGTTTCGCCGAGGAAACACTCCACCACTTTCATGGCAGATTAGATTTAAAATTGCAGCTGAAATTGGCACTGGGTTATTGTTCCTACACCAGACAAAACCAGAACCACTAGTACACCGTGACCTGAAACCAGCTAACATCTTGCTCGACCGAAATTATGTAGCCAAAATCAGTGACGTTGGCTTGGCAAGGCTAGTGCCCCCATCTGTAGCAGAAAATGTAACACAATATCGCATGACATCTACCGCTGGCACTTTCTGCTATATTGATCCGGAGTATCAGCAGACAGGAATGCTTGGTGTGAAGTCTGACATATACTCACTAGGAATCATGCTCCTGCAGATAATAACAGCTAAACCACCAATGGGATTGACACATTATGTTGAAAGAAGCATTGAGAAGGGGACATTTCATCAGATGCTGGATCCAGCAGTGACTGATTGGCCAGTAGAAGAAGCCCTGGGCTTTGCAAAGATGGCACTCCAATGTGCAGAGCTGAGGAGAAAGGACAGACCTGACCTTGGCAAGGTTGTGTTGCCTGAACTGAACAGATTGAGAGTCCTTGCTGAGGATAGCATGTACCGTAACGAATGCTTCTATATAAACTCCGCACGTAGCTCACCTGCTAACAGCCAAGTTTCTCTGCAACTTGTAAGTCTCTAG	2319	0.4459	MWSQKGNVEKKDGTNGLVAVAIDKDKGSQNALKWAIDHLIHKGQTIILIHVKVKTPPLASSQPLTAPRVNHFSGDECPLICKNPDAQTKEVFLPFRVFCTRKDVQCKDIILEESDVAKALNEYVSHTGIEHLVIGSSSKNGLLKRFKVADIPGSVSKGAPDFCTVYVINKGKIQSMRSASRSAPSISPLRNQLLGQSTSRSETDVRMLPPSNKVNERRSYEAPRRSQEELDSIRSPFTRRGMNMKSFGEISVPESDISYVSSGRPSVDRIFPSLYSDNMDTSMSNASRPSFGSDVDASPCSFESMNFGRKSLDILSSQDFSSFSQESDRLSTSSQAMDEVEAEMRRLRLELKQTMEMYSNACKEALSAKQKAIELQRWKMEEERRMEETRNAGEAALAIVEKEKAKSRAAMEAAEAHKRLAELEAQKRINAEMKAFREAEEKKRALDALANTDVRYRRYSIEEIESATEFFASSRKIGEGGYGPVYKCHLDHTPVAVKILRPDAAQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMANGSLDDCLFRRGNTPPLSWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVAENVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMLLQIITAKPPMGLTHYVERSIEKGTFHQMLDPAVTDWPVEEALGFAKMALQCAELRRKDRPDLGKVVLPELNRLRVLAEDSMYRNECFYINSARSSPANSQVSLQLVSL*	773

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte8g01056	772	MobiDBLite	consensus disorder prediction	178	229	-	-
	Pte8g01056	772	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	443	543	-	-
	Pte8g01056	772	Gene3D	Phosphorylase Kinase; domain 1	440	543	-	-
	Pte8g01056	772	Gene3D	HUPs	17	168	IPR014729	-
	Pte8g01056	772	SMART	serkin_6	471	731	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g01056	772	SUPERFAMILY	Protein kinase-like (PK-like)	454	730	IPR011009	-
	Pte8g01056	772	Pfam	Protein kinase domain	472	723	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g01056	772	Gene3D	Transferase(Phosphotransferase) domain 1	544	751	-	-
	Pte8g01056	772	Pfam	Universal stress protein family	18	146	IPR006016	-
	Pte8g01056	772	CDD	STK_N	17	171	-	-
	Pte8g01056	772	FunFam	U-box domain-containing protein 51	544	744	-	-
	Pte8g01056	772	Coils	Coil	330	364	-	-
	Pte8g01056	772	SUPERFAMILY	Adenine nucleotide alpha hydrolases-like	18	146	-	-
	Pte8g01056	772	Coils	Coil	397	426	-	-
	Pte8g01056	772	ProSiteProfiles	Protein kinase domain profile.	471	734	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte8g01056	772	MobiDBLite	consensus disorder prediction	178	208	-	-
	Pte8g01056	772	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	589	601	IPR008271	GO:0004672\|GO:0006468
	Pte8g01056	772	PANTHER	OS02G0152300 PROTEIN	18	749	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte8g01056	Pte-Chr8	34766558	34771479	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte8g01056	1	767	Receptor kinase-like Gene Family	AT1G78940	56.743	0.0	816

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-IXb	Pte8g01056		Pkinase	1.4e-40	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte8g01056	-		-	qsa:O6P43_019335	1109.75